2ca1: Difference between revisions
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==Crystal structure of the IBV coronavirus nucleocapsid== | ==Crystal structure of the IBV coronavirus nucleocapsid== | ||
<StructureSection load='2ca1' size='340' side='right' caption='[[2ca1]], [[Resolution|resolution]] 2.60Å' scene=''> | <StructureSection load='2ca1' size='340' side='right'caption='[[2ca1]], [[Resolution|resolution]] 2.60Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2ca1]] is a 2 chain structure with sequence from [ | <table><tr><td colspan='2'>[[2ca1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Infectious_bronchitis_virus Infectious bronchitis virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CA1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CA1 FirstGlance]. <br> | ||
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6Å</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ca1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ca1 OCA], [https://pdbe.org/2ca1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ca1 RCSB], [https://www.ebi.ac.uk/pdbsum/2ca1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ca1 ProSAT]</span></td></tr> | |||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/NCAP_IBVB NCAP_IBVB] Packages the positive strand viral genome RNA into a helical ribonucleocapsid (RNP) and plays a fundamental role during virion assembly through its interactions with the viral genome and membrane protein M. Plays an important role in enhancing the efficiency of subgenomic viral RNA transcription as well as viral replication.[HAMAP-Rule:MF_04097] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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==See Also== | ==See Also== | ||
*[[Nucleoprotein|Nucleoprotein]] | *[[Nucleoprotein 3D structures|Nucleoprotein 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Infectious bronchitis virus]] | ||
[[Category: Bowman | [[Category: Large Structures]] | ||
[[Category: Collison | [[Category: Bowman BR]] | ||
[[Category: Fan | [[Category: Collison EW]] | ||
[[Category: Jayaram | [[Category: Fan H]] | ||
[[Category: Jayaram | [[Category: Jayaram H]] | ||
[[Category: Lescar | [[Category: Jayaram J]] | ||
[[Category: Ooi | [[Category: Lescar J]] | ||
[[Category: Prasad | [[Category: Ooi A]] | ||
[[Category: Prasad BVV]] | |||
