2jvd: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(14 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2jvd.jpg|left|200px]]


{{Structure
==Solution NMR structure of the folded N-terminal fragment of UPF0291 protein ynzC from Bacillus subtilis. Northeast Structural Genomics target SR384-1-46==
|PDB= 2jvd |SIZE=350|CAPTION= <scene name='initialview01'>2jvd</scene>
<StructureSection load='2jvd' size='340' side='right'caption='[[2jvd]]' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[2jvd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JVD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JVD FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
|GENE= ynzC, BSU17880 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 Bacillus subtilis])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jvd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jvd OCA], [https://pdbe.org/2jvd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jvd RCSB], [https://www.ebi.ac.uk/pdbsum/2jvd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jvd ProSAT], [https://www.topsan.org/Proteins/NESGC/2jvd TOPSAN]</span></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam05979 DUF896]</span>
</table>
|RELATEDENTRY=[[2hep|2HEP]]
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jvd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jvd OCA], [http://www.ebi.ac.uk/pdbsum/2jvd PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2jvd RCSB]</span>
[https://www.uniprot.org/uniprot/YNZC_BACSU YNZC_BACSU]
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Solution NMR structure of the folded N-terminal fragment of UPF0291 protein ynzC from Bacillus subtilis. Northeast Structural Genomics target SR384-1-46'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jv/2jvd_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
2JVD is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JVD OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jvd ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Acton, T B.]]
[[Category: Acton TB]]
[[Category: Aramini, J M.]]
[[Category: Aramini JM]]
[[Category: Baran, M C.]]
[[Category: Baran MC]]
[[Category: Huang, Y J.]]
[[Category: Huang YJ]]
[[Category: Jiang, M.]]
[[Category: Jiang M]]
[[Category: Montelione, G T.]]
[[Category: Montelione GT]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Owens LA]]
[[Category: Owens, L A.]]
[[Category: Sharma S]]
[[Category: Sharma, S.]]
[[Category: Stokes K]]
[[Category: Stokes, K.]]
[[Category: Swapna GVT]]
[[Category: Swapna, G V.T.]]
[[Category: Xiao R]]
[[Category: Xiao, R.]]
[[Category: Zhao L]]
[[Category: Zhao, L.]]
[[Category: construct optimization]]
[[Category: cytoplasm]]
[[Category: nesg]]
[[Category: northeast structural genomics consortium]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: solution nmr structure]]
[[Category: structural genomic]]
[[Category: unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:02:01 2008''

Latest revision as of 09:42, 9 May 2024

Solution NMR structure of the folded N-terminal fragment of UPF0291 protein ynzC from Bacillus subtilis. Northeast Structural Genomics target SR384-1-46

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA