2j41: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:


==Crystal structure of Staphylococcus aureus guanylate monophosphate kinase==
==Crystal structure of Staphylococcus aureus guanylate monophosphate kinase==
<StructureSection load='2j41' size='340' side='right' caption='[[2j41]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='2j41' size='340' side='right'caption='[[2j41]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2j41]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J41 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2J41 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2j41]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J41 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2J41 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=5GP:GUANOSINE-5-MONOPHOSPHATE'>5GP</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Guanylate_kinase Guanylate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.8 2.7.4.8] </span></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5GP:GUANOSINE-5-MONOPHOSPHATE'>5GP</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2j41 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j41 OCA], [http://pdbe.org/2j41 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2j41 RCSB], [http://www.ebi.ac.uk/pdbsum/2j41 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2j41 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2j41 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j41 OCA], [https://pdbe.org/2j41 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2j41 RCSB], [https://www.ebi.ac.uk/pdbsum/2j41 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2j41 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/KGUA_STAAC KGUA_STAAC]] Essential for recycling GMP and indirectly, cGMP (By similarity).  
[https://www.uniprot.org/uniprot/KGUA_STAAC KGUA_STAAC] Essential for recycling GMP and indirectly, cGMP (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 15: Line 15:
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j4/2j41_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j4/2j41_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 31: Line 31:


==See Also==
==See Also==
*[[Guanylate kinase|Guanylate kinase]]
*[[Guanylate kinase 3D structures|Guanylate kinase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Guanylate kinase]]
[[Category: Large Structures]]
[[Category: Charles, I]]
[[Category: Dhaliwal, B]]
[[Category: Hawkins, A R]]
[[Category: Lockyer, M]]
[[Category: Omari, K El]]
[[Category: Stammers, D K]]
[[Category: Atp-binding]]
[[Category: Gmk]]
[[Category: Gmp]]
[[Category: Kinase]]
[[Category: Nucleotide-binding]]
[[Category: Staphylococcus aureus]]
[[Category: Staphylococcus aureus]]
[[Category: Transferase]]
[[Category: Charles I]]
[[Category: Dhaliwal B]]
[[Category: El Omari K]]
[[Category: Hawkins AR]]
[[Category: Lockyer M]]
[[Category: Stammers DK]]