2o38: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
 
(11 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2o38.gif|left|200px]]


{{Structure
==Putative XRE Family Transcriptional Regulator==
|PDB= 2o38 |SIZE=350|CAPTION= <scene name='initialview01'>2o38</scene>, resolution 1.83&Aring;
<StructureSection load='2o38' size='340' side='right'caption='[[2o38]], [[Resolution|resolution]] 1.83&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[2o38]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodopseudomonas_palustris_CGA009 Rhodopseudomonas palustris CGA009]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O38 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O38 FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.83&#8491;</td></tr>
|GENE= RPA3824 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1076 Rhodopseudomonas palustris])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG5606 COG5606]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o38 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o38 OCA], [https://pdbe.org/2o38 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o38 RCSB], [https://www.ebi.ac.uk/pdbsum/2o38 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o38 ProSAT], [https://www.topsan.org/Proteins/MCSG/2o38 TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2o38 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o38 OCA], [http://www.ebi.ac.uk/pdbsum/2o38 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2o38 RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/Q6N370_RHOPA Q6N370_RHOPA]
 
== Evolutionary Conservation ==
'''Putative XRE Family Transcriptional Regulator'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o3/2o38_consurf.spt"</scriptWhenChecked>
2O38 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Rhodopseudomonas_palustris Rhodopseudomonas palustris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O38 OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Rhodopseudomonas palustris]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Single protein]]
  </jmolCheckbox>
[[Category: Edwards, A.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o38 ConSurf].
[[Category: Evdokimova, E.]]
<div style="clear:both"></div>
[[Category: Joachimiak, A.]]
__TOC__
[[Category: Kagan, O.]]
</StructureSection>
[[Category: Kim, Y.]]
[[Category: Large Structures]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Rhodopseudomonas palustris CGA009]]
[[Category: Savchenko, A.]]
[[Category: Edwards A]]
[[Category: alpha-beta]]
[[Category: Evdokimova E]]
[[Category: helix-turn-helix]]
[[Category: Joachimiak A]]
[[Category: mcsg]]
[[Category: Kagan O]]
[[Category: midwest center for structural genomic]]
[[Category: Kim Y]]
[[Category: protein structure initiative]]
[[Category: Savchenko A]]
[[Category: psi-2]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:12:06 2008''
Retrieved from "https://proteopedia.org/2o38"