2okq: Difference between revisions

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[[Image:2okq.gif|left|200px]]


{{Structure
==Crystal structure of unknown conserved ybaA protein from Shigella flexneri==
|PDB= 2okq |SIZE=350|CAPTION= <scene name='initialview01'>2okq</scene>, resolution 1.80&Aring;
<StructureSection load='2okq' size='340' side='right'caption='[[2okq]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>
<table><tr><td colspan='2'>[[2okq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri Shigella flexneri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OKQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OKQ FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
|GENE= ybaA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=623 Shigella flexneri])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG5507 COG5507]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2okq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2okq OCA], [https://pdbe.org/2okq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2okq RCSB], [https://www.ebi.ac.uk/pdbsum/2okq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2okq ProSAT], [https://www.topsan.org/Proteins/MCSG/2okq TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2okq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2okq OCA], [http://www.ebi.ac.uk/pdbsum/2okq PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2okq RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/YBAA_SHIFL YBAA_SHIFL]
 
== Evolutionary Conservation ==
'''Crystal structure of unknown conserved ybaA protein from Shigella flexneri'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ok/2okq_consurf.spt"</scriptWhenChecked>
2OKQ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Shigella_flexneri Shigella flexneri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OKQ OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2okq ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Shigella flexneri]]
[[Category: Shigella flexneri]]
[[Category: Single protein]]
[[Category: Anderson WF]]
[[Category: Anderson, W F.]]
[[Category: Brunzelle JS]]
[[Category: Brunzelle, J S.]]
[[Category: Collart FR]]
[[Category: Collart, F R.]]
[[Category: Joachimiak A]]
[[Category: Joachimiak, A.]]
[[Category: Kiryukhina O]]
[[Category: Kiryukhina, O.]]
[[Category: Minasov G]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Shuvalova L]]
[[Category: Minasov, G.]]
[[Category: Vorontsov II]]
[[Category: Shuvalova, L.]]
[[Category: Vorontsov, I I.]]
[[Category: crystal structure]]
[[Category: mcsg]]
[[Category: midwest center for structural genomic]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: structural genomic]]
[[Category: ybaa protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:19:11 2008''
Retrieved from "https://proteopedia.org/2okq"