2p1g: Difference between revisions

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[[Image:2p1g.gif|left|200px]]


{{Structure
==Crystal structure of a putative xylanase from Bacteroides fragilis==
|PDB= 2p1g |SIZE=350|CAPTION= <scene name='initialview01'>2p1g</scene>, resolution 1.800&Aring;
<StructureSection load='2p1g' size='340' side='right'caption='[[2p1g]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[2p1g]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_fragilis_YCH46 Bacteroides fragilis YCH46]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P1G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P1G FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
|GENE= BF2036 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=817 Bacteroides fragilis])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p1g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p1g OCA], [https://pdbe.org/2p1g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p1g RCSB], [https://www.ebi.ac.uk/pdbsum/2p1g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p1g ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2p1g TOPSAN]</span></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam07313 DUF1460]</span>
</table>
|RELATEDENTRY=
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p1g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p1g OCA], [http://www.ebi.ac.uk/pdbsum/2p1g PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2p1g RCSB]</span>
[https://www.uniprot.org/uniprot/Q64UP6_BACFR Q64UP6_BACFR]
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Crystal structure of a putative xylanase from Bacteroides fragilis'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p1/2p1g_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
2P1G is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis Bacteroides fragilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P1G OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Bacteroides fragilis]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p1g ConSurf].
[[Category: Almo, S C.]]
<div style="clear:both"></div>
[[Category: Bain, K T.]]
__TOC__
[[Category: Bonanno, J B.]]
</StructureSection>
[[Category: Burley, S K.]]
[[Category: Bacteroides fragilis YCH46]]
[[Category: Freeman, J.]]
[[Category: Large Structures]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Almo SC]]
[[Category: Sauder, M J.]]
[[Category: Bain KT]]
[[Category: Smith, D.]]
[[Category: Bonanno JB]]
[[Category: Sridhar, V.]]
[[Category: Burley SK]]
[[Category: Wasserman, S.]]
[[Category: Freeman J]]
[[Category: Zhang, F.]]
[[Category: Sauder JM]]
[[Category: new york structural genomix research consortium]]
[[Category: Smith D]]
[[Category: nysgxrc]]
[[Category: Sridhar V]]
[[Category: protein structure initiative]]
[[Category: Wasserman S]]
[[Category: psi-2]]
[[Category: Zhang F]]
[[Category: structural genomic]]
[[Category: unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:26:57 2008''

Latest revision as of 09:07, 21 February 2024

Crystal structure of a putative xylanase from Bacteroides fragilis

2p1g, resolution 1.80Å

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