2p9b: Difference between revisions

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[[Image:2p9b.jpg|left|200px]]


{{Structure
==Crystal structure of putative prolidase from Bifidobacterium longum==
|PDB= 2p9b |SIZE=350|CAPTION= <scene name='initialview01'>2p9b</scene>, resolution 1.70&Aring;
<StructureSection load='2p9b' size='340' side='right'caption='[[2p9b]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P9B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P9B FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
|GENE= BL1453 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=216816 Bifidobacterium longum])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01297 D-aminoacylase], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01299 Met_dep_hydrolase_A], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK07203 PRK07203]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p9b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p9b OCA], [https://pdbe.org/2p9b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p9b RCSB], [https://www.ebi.ac.uk/pdbsum/2p9b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p9b ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2p9b TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p9b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p9b OCA], [http://www.ebi.ac.uk/pdbsum/2p9b PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2p9b RCSB]</span>
== Evolutionary Conservation ==
}}
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
'''Crystal structure of putative prolidase from Bifidobacterium longum'''
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p9/2p9b_consurf.spt"</scriptWhenChecked>
 
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
==About this Structure==
    <text>to colour the structure by Evolutionary Conservation</text>
2P9B is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bifidobacterium_longum Bifidobacterium longum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P9B OCA].  
  </jmolCheckbox>
[[Category: Bifidobacterium longum]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p9b ConSurf].
[[Category: Single protein]]
<div style="clear:both"></div>
[[Category: Burley, S K.]]
__TOC__
[[Category: Kumaran, D.]]
</StructureSection>
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Large Structures]]
[[Category: Swaminathan, S.]]
[[Category: Burley SK]]
[[Category: 9350a]]
[[Category: Kumaran D]]
[[Category: amidohydrolase]]
[[Category: Swaminathan S]]
[[Category: new york structural genomix research consortium]]
[[Category: nysgxrc]]
[[Category: prolidase]]
[[Category: protein structure initiative ii]]
[[Category: psi-2]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:32:48 2008''

Latest revision as of 01:18, 21 November 2024

Crystal structure of putative prolidase from Bifidobacterium longum

2p9b, resolution 1.70Å

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