2phc: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(12 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2phc.jpg|left|200px]]


{{Structure
==Crystal structure of conserved uncharacterized protein PH0987 from Pyrococcus horikoshii==
|PDB= 2phc |SIZE=350|CAPTION= <scene name='initialview01'>2phc</scene>, resolution 2.290&Aring;
<StructureSection load='2phc' size='340' side='right'caption='[[2phc]], [[Resolution|resolution]] 2.29&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[2phc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PHC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PHC FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.29&#8491;</td></tr>
|GENE= PH0987 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=53953 Pyrococcus horikoshii])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2phc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2phc OCA], [https://pdbe.org/2phc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2phc RCSB], [https://www.ebi.ac.uk/pdbsum/2phc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2phc ProSAT], [https://www.topsan.org/Proteins/RSGI/2phc TOPSAN]</span></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02682 AHS1]</span>
</table>
|RELATEDENTRY=
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2phc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2phc OCA], [http://www.ebi.ac.uk/pdbsum/2phc PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2phc RCSB]</span>
[https://www.uniprot.org/uniprot/O58715_PYRHO O58715_PYRHO]
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Crystal structure of conserved uncharacterized protein PH0987 from Pyrococcus horikoshii'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ph/2phc_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
2PHC is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PHC OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Pyrococcus horikoshii]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2phc ConSurf].
[[Category: Chen, L.]]
<div style="clear:both"></div>
[[Category: Chrzas, J.]]
__TOC__
[[Category: Ebihara, A.]]
</StructureSection>
[[Category: Fu, Z-Q.]]
[[Category: Large Structures]]
[[Category: II, J T.Swindell.]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Kuramitsu, S.]]
[[Category: Chen L]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Chrzas J]]
[[Category: Rose, J P.]]
[[Category: Ebihara A]]
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
[[Category: Fu Z-Q]]
[[Category: Shinkai, A.]]
[[Category: Kuramitsu S]]
[[Category: Wang, B-C.]]
[[Category: Rose JP]]
[[Category: Yokoyama, S.]]
[[Category: Shinkai A]]
[[Category: Zhu, J.]]
[[Category: Swindell II JT]]
[[Category: ph0730]]
[[Category: Wang B-C]]
[[Category: protein structure initiative]]
[[Category: Yokoyama S]]
[[Category: psi]]
[[Category: Zhu J]]
[[Category: pyrococcus horikoshii]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: secsg]]
[[Category: southeast collaboratory for structural genomic]]
[[Category: structural genomic]]
[[Category: x-ray diffraction]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:35:52 2008''
Retrieved from "https://proteopedia.org/2phc"