2vyc: Difference between revisions
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==Crystal Structure of Acid Induced Arginine Decarboxylase from E. coli== | ==Crystal Structure of Acid Induced Arginine Decarboxylase from E. coli== | ||
<StructureSection load='2vyc' size='340' side='right' caption='[[2vyc]], [[Resolution|resolution]] 2.40Å' scene=''> | <StructureSection load='2vyc' size='340' side='right'caption='[[2vyc]], [[Resolution|resolution]] 2.40Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2vyc]] is a 10 chain structure with sequence from [ | <table><tr><td colspan='2'>[[2vyc]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_BL21(DE3) Escherichia coli BL21(DE3)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VYC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VYC FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vyc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vyc OCA], [https://pdbe.org/2vyc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vyc RCSB], [https://www.ebi.ac.uk/pdbsum/2vyc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vyc ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/ADIA_ECOLI ADIA_ECOLI] ADC can be found in two forms: biodegradative and biosynthetic. The biodegradative form may play a role in regulating pH by consuming proteins. | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vy/2vyc_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vy/2vyc_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| Line 33: | Line 33: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Andrell J]] | |||
[[Category: Andrell | [[Category: Carpenter EP]] | ||
[[Category: Carpenter | [[Category: Hicks MG]] | ||
[[Category: Hicks | [[Category: Iwata S]] | ||
[[Category: Iwata | [[Category: Maher MJ]] | ||
[[Category: Maher | [[Category: Palmer T]] | ||
[[Category: Palmer | |||
