2r6t: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(11 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2r6t.jpg|left|200px]]


{{Structure
==Structure of a R132K variant PduO-type ATP:co(I)rrinoid adenosyltransferase from Lactobacillus reuteri complexed with ATP==
|PDB= 2r6t |SIZE=350|CAPTION= <scene name='initialview01'>2r6t</scene>, resolution 2.610&Aring;
<StructureSection load='2r6t' size='340' side='right'caption='[[2r6t]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=ATP:ADENOSINE-5&#39;-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
<table><tr><td colspan='2'>[[2r6t]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Limosilactobacillus_reuteri Limosilactobacillus reuteri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R6T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R6T FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.61&#8491;</td></tr>
|GENE= cobA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1598 Lactobacillus reuteri])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r6t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r6t OCA], [https://pdbe.org/2r6t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r6t RCSB], [https://www.ebi.ac.uk/pdbsum/2r6t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r6t ProSAT]</span></td></tr>
|RELATEDENTRY=[[2r6x|2R6X]]
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2r6t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r6t OCA], [http://www.ebi.ac.uk/pdbsum/2r6t PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2r6t RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/Q50EJ2_LIMRT Q50EJ2_LIMRT]
 
== Evolutionary Conservation ==
'''Structure of a R132K variant PduO-type ATP:co(I)rrinoid adenosyltransferase from Lactobacillus reuteri complexed with ATP'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r6/2r6t_consurf.spt"</scriptWhenChecked>
2R6T is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Lactobacillus_reuteri Lactobacillus reuteri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R6T OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Lactobacillus reuteri]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Single protein]]
  </jmolCheckbox>
[[Category: Escalante-Semerena, J C.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2r6t ConSurf].
[[Category: Maurice, M St.]]
<div style="clear:both"></div>
[[Category: Mera, P E.]]
__TOC__
[[Category: Rayment, I.]]
</StructureSection>
[[Category: adenosyltransferase variant]]
[[Category: Large Structures]]
[[Category: atp binding]]
[[Category: Limosilactobacillus reuteri]]
 
[[Category: Escalante-Semerena JC]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:57:13 2008''
[[Category: Mera PE]]
[[Category: Rayment I]]
[[Category: St Maurice M]]