2v8u: Difference between revisions

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[[Image:2v8u.jpg|left|200px]]


{{Structure
==Atomic resolution structure of Mn catalase from Thermus Thermophilus==
|PDB= 2v8u |SIZE=350|CAPTION= <scene name='initialview01'>2v8u</scene>, resolution 1.05&Aring;
<StructureSection load='2v8u' size='340' side='right'caption='[[2v8u]], [[Resolution|resolution]] 1.05&Aring;' scene=''>
|SITE= <scene name='pdbsite=AC1:So4+Binding+Site+For+Chain+B'>AC1</scene>
== Structural highlights ==
|LIGAND= <scene name='pdbligand=LI:LITHIUM+ION'>LI</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=O:OXYGEN+ATOM'>O</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
<table><tr><td colspan='2'>[[2v8u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB27 Thermus thermophilus HB27]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V8U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V8U FirstGlance]. <br>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Catalase Catalase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.6 1.11.1.6] </span>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.05&#8491;</td></tr>
|GENE=
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LI:LITHIUM+ION'>LI</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=O:OXYGEN+ATOM'>O</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v8u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v8u OCA], [https://pdbe.org/2v8u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v8u RCSB], [https://www.ebi.ac.uk/pdbsum/2v8u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v8u ProSAT]</span></td></tr>
|RELATEDENTRY=[[2cwl|2CWL]], [[2v8t|2V8T]]
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2v8u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v8u OCA], [http://www.ebi.ac.uk/pdbsum/2v8u PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2v8u RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/Q84DB4_THETH Q84DB4_THETH]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v8/2v8u_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2v8u ConSurf].
<div style="clear:both"></div>


'''ATOMIC RESOLUTION STRUCTURE OF MN CATALASE FROM THERMUS THERMOPHILUS'''
==See Also==
 
*[[Catalase 3D structures|Catalase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2V8U is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V8U OCA].
[[Category: Large Structures]]
[[Category: Catalase]]
[[Category: Thermus thermophilus HB27]]
[[Category: Single protein]]
[[Category: Antonyuk SV]]
[[Category: Thermus thermophilus]]
[[Category: Artymiuk PJ]]
[[Category: Antonyuk, S V.]]
[[Category: Barynin VV]]
[[Category: Artymiuk, P J.]]
[[Category: Harrison PM]]
[[Category: Barynin, V V.]]
[[Category: Lamsin VS]]
[[Category: Harrison, P M.]]
[[Category: Melik-Adamyan WR]]
[[Category: Lamsin, V S.]]
[[Category: Popov AN]]
[[Category: Melik-Adamyan, W R.]]
[[Category: Vaguine AA]]
[[Category: Popov, A N.]]
[[Category: Vaguine, A A.]]
[[Category: manganese catalase]]
[[Category: oxidoreductase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:09:40 2008''

Latest revision as of 09:56, 9 May 2024

Atomic resolution structure of Mn catalase from Thermus Thermophilus

2v8u, resolution 1.05Å

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