2yz2: Difference between revisions

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[[Image:2yz2.jpg|left|200px]]


{{Structure
==Crystal structure of the ABC transporter in the cobalt transport system==
|PDB= 2yz2 |SIZE=350|CAPTION= <scene name='initialview01'>2yz2</scene>, resolution 2.30&Aring;
<StructureSection load='2yz2' size='340' side='right'caption='[[2yz2]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[2yz2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima_MSB8 Thermotoga maritima MSB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZ2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YZ2 FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
|GENE=  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yz2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yz2 OCA], [https://pdbe.org/2yz2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yz2 RCSB], [https://www.ebi.ac.uk/pdbsum/2yz2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yz2 ProSAT], [https://www.topsan.org/Proteins/RSGI/2yz2 TOPSAN]</span></td></tr>
|DOMAIN=
</table>
|RELATEDENTRY=
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yz2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yz2 OCA], [http://www.ebi.ac.uk/pdbsum/2yz2 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2yz2 RCSB]</span>
[https://www.uniprot.org/uniprot/ECFA2_THEMA ECFA2_THEMA] ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (Probable). Expression of the complex plus RibU in E.coli allows riboflavin uptake; uptake does not occur in the absence of RibU or the EcfA1A2T complex.<ref>PMID:23359690</ref>
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Crystal structure of the ABC transporter in the cobalt transport system'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yz/2yz2_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
2YZ2 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZ2 OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Single protein]]
  </jmolCheckbox>
[[Category: Thermotoga maritima]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yz2 ConSurf].
[[Category: Bessho, Y.]]
<div style="clear:both"></div>
[[Category: Ethayathullah, A S.]]
== References ==
[[Category: Kaur, P.]]
<references/>
[[Category: Padmanabhan, B.]]
__TOC__
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
</StructureSection>
[[Category: Singh, T P.]]
[[Category: Large Structures]]
[[Category: Yokoyama, S.]]
[[Category: Thermotoga maritima MSB8]]
[[Category: abc transporter]]
[[Category: Bessho Y]]
[[Category: atp-binding protein]]
[[Category: Ethayathullah AS]]
[[Category: cobalt transport]]
[[Category: Kaur P]]
[[Category: hydrolase]]
[[Category: Padmanabhan B]]
[[Category: inner membrane]]
[[Category: Singh TP]]
[[Category: membrane]]
[[Category: Yokoyama S]]
[[Category: national project on protein structural and functional analyse]]
[[Category: nppsfa]]
[[Category: nucleotide-binding]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: structural genomic]]
[[Category: tm0222]]
 
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Retrieved from "https://proteopedia.org/2yz2"