3gas: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:


==Crystal Structure of Helicobacter pylori Heme Oxygenase Hugz in Complex with Heme==
==Crystal Structure of Helicobacter pylori Heme Oxygenase Hugz in Complex with Heme==
<StructureSection load='3gas' size='340' side='right' caption='[[3gas]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='3gas' size='340' side='right'caption='[[3gas]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3gas]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori_nctc_11639 Helicobacter pylori nctc 11639]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GAS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GAS FirstGlance]. <br>
<table><tr><td colspan='2'>[[3gas]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_NCTC_11639 Helicobacter pylori NCTC 11639]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GAS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GAS FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AZI:AZIDE+ION'>AZI</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AZI:AZIDE+ION'>AZI</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HugZ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=637383 Helicobacter pylori NCTC 11639])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gas FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gas OCA], [https://pdbe.org/3gas PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gas RCSB], [https://www.ebi.ac.uk/pdbsum/3gas PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gas ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Heme_oxygenase Heme oxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.99.3 1.14.99.3] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gas FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gas OCA], [http://pdbe.org/3gas PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gas RCSB], [http://www.ebi.ac.uk/pdbsum/3gas PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3gas ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/C0LU01_HELPX C0LU01_HELPX]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 15: Line 15:
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ga/3gas_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ga/3gas_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 22: Line 22:


==See Also==
==See Also==
*[[Heme oxygenase|Heme oxygenase]]
*[[Heme oxygenase 3D structures|Heme oxygenase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Helicobacter pylori nctc 11639]]
[[Category: Helicobacter pylori NCTC 11639]]
[[Category: Heme oxygenase]]
[[Category: Large Structures]]
[[Category: Guo, G]]
[[Category: Guo G]]
[[Category: Guo, Y]]
[[Category: Guo Y]]
[[Category: Hu, Y L]]
[[Category: Hu YL]]
[[Category: Jiang, F]]
[[Category: Jiang F]]
[[Category: Wang, D C]]
[[Category: Wang DC]]
[[Category: Zou, Q M]]
[[Category: Zou QM]]
[[Category: Fmn-binding split barrel]]
[[Category: Oxidoreductase]]

Latest revision as of 09:11, 30 October 2024

Crystal Structure of Helicobacter pylori Heme Oxygenase Hugz in Complex with Heme

3gas, resolution 1.80Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=3gas&oldid=4248393"