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[[Image:3b79.gif|left|200px]]


{{Structure
==Crystal structure of the N-terminal peptidase C39 like domain of the toxin secretion ATP-binding protein from Vibrio parahaemolyticus==
|PDB= 3b79 |SIZE=350|CAPTION= <scene name='initialview01'>3b79</scene>, resolution 1.37&Aring;
<StructureSection load='3b79' size='340' side='right'caption='[[3b79]], [[Resolution|resolution]] 1.37&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[3b79]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_RIMD_2210633 Vibrio parahaemolyticus RIMD 2210633]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B79 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3B79 FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.37&#8491;</td></tr>
|GENE= VPA1736 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223926 Vibrio parahaemolyticus RIMD 2210633])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3b79 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b79 OCA], [https://pdbe.org/3b79 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3b79 RCSB], [https://www.ebi.ac.uk/pdbsum/3b79 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3b79 ProSAT], [https://www.topsan.org/Proteins/MCSG/3b79 TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3b79 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b79 OCA], [http://www.ebi.ac.uk/pdbsum/3b79 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3b79 RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/Q87FE3_VIBPA Q87FE3_VIBPA]
 
== Evolutionary Conservation ==
'''Crystal structure of the N-terminal peptidase C39 like domain of the toxin secretion ATP-binding protein from Vibrio parahaemolyticus'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b7/3b79_consurf.spt"</scriptWhenChecked>
3B79 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_rimd_2210633 Vibrio parahaemolyticus rimd 2210633]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B79 OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Vibrio parahaemolyticus rimd 2210633]]
  </jmolCheckbox>
[[Category: Abdullah, J.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3b79 ConSurf].
[[Category: Joachimiak, A.]]
<div style="clear:both"></div>
[[Category: Kim, Y.]]
__TOC__
[[Category: Li, H.]]
</StructureSection>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Large Structures]]
[[Category: alpha-beta structure]]
[[Category: Vibrio parahaemolyticus RIMD 2210633]]
[[Category: atp-binding]]
[[Category: Abdullah J]]
[[Category: mcsg]]
[[Category: Joachimiak A]]
[[Category: membrane]]
[[Category: Kim Y]]
[[Category: midwest center for structural genomic]]
[[Category: Li H]]
[[Category: nucleotide binding protein]]
[[Category: nucleotide-binding]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: structural genomic]]
[[Category: transmembrane]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:23:44 2008''

Latest revision as of 05:41, 17 October 2024

Crystal structure of the N-terminal peptidase C39 like domain of the toxin secretion ATP-binding protein from Vibrio parahaemolyticus

3b79, resolution 1.37Å

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