3bjb: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3bjb.jpg|left|200px]]


{{Structure
==Crystal structure of a TetR transcriptional regulator from Rhodococcus sp. RHA1==
|PDB= 3bjb |SIZE=350|CAPTION= <scene name='initialview01'>3bjb</scene>, resolution 2.50&Aring;
<StructureSection load='3bjb' size='340' side='right'caption='[[3bjb]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
<table><tr><td colspan='2'>[[3bjb]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodococcus_jostii_RHA1 Rhodococcus jostii RHA1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BJB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BJB FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
|GENE= RHA1_ro05814 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=101510 Rhodococcus sp. RHA1])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bjb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bjb OCA], [https://pdbe.org/3bjb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bjb RCSB], [https://www.ebi.ac.uk/pdbsum/3bjb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bjb ProSAT], [https://www.topsan.org/Proteins/MCSG/3bjb TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bjb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bjb OCA], [http://www.ebi.ac.uk/pdbsum/3bjb PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3bjb RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/Q0S4E5_RHOJR Q0S4E5_RHOJR]
 
== Evolutionary Conservation ==
'''Crystal structure of a TetR transcriptional regulator from Rhodococcus sp. RHA1'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bj/3bjb_consurf.spt"</scriptWhenChecked>
3BJB is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Rhodococcus_sp._rha1 Rhodococcus sp. rha1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BJB OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Rhodococcus sp. rha1]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Single protein]]
  </jmolCheckbox>
[[Category: Edwards, A M.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bjb ConSurf].
[[Category: Evdokimova, E.]]
<div style="clear:both"></div>
[[Category: Joachimiak, A.]]
__TOC__
[[Category: Kudritska, M.]]
</StructureSection>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Large Structures]]
[[Category: Savchenko, A.]]
[[Category: Rhodococcus jostii RHA1]]
[[Category: Tan, K.]]
[[Category: Edwards AM]]
[[Category: apc7331]]
[[Category: Evdokimova E]]
[[Category: dna-binding]]
[[Category: Joachimiak A]]
[[Category: mcsg]]
[[Category: Kudritska M]]
[[Category: midwest center for structural genomic]]
[[Category: Savchenko A]]
[[Category: protein structure initiative]]
[[Category: Tan K]]
[[Category: psi-2]]
[[Category: rhodococcus sp. rha1]]
[[Category: structural genomic]]
[[Category: tetr]]
[[Category: transcription]]
[[Category: transcription regulation]]
[[Category: transcription regulator]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:26:58 2008''

Latest revision as of 05:42, 17 October 2024

Crystal structure of a TetR transcriptional regulator from Rhodococcus sp. RHA1

3bjb, resolution 2.50Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA