3c0d: Difference between revisions

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[[Image:3c0d.jpg|left|200px]]


{{Structure
==Crystal structure of the putative nitrite reductase NADPH (small subunit) oxidoreductase protein Q87HB1. Northeast Structural Genomics Consortium target VpR162==
|PDB= 3c0d |SIZE=350|CAPTION= <scene name='initialview01'>3c0d</scene>, resolution 2.40&Aring;
<StructureSection load='3c0d' size='340' side='right'caption='[[3c0d]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[3c0d]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_RIMD_2210633 Vibrio parahaemolyticus RIMD 2210633]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C0D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C0D FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
|GENE= VPA1054 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223926 Vibrio parahaemolyticus RIMD 2210633])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c0d OCA], [https://pdbe.org/3c0d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c0d RCSB], [https://www.ebi.ac.uk/pdbsum/3c0d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c0d ProSAT], [https://www.topsan.org/Proteins/NESGC/3c0d TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3c0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c0d OCA], [http://www.ebi.ac.uk/pdbsum/3c0d PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3c0d RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/Q87HB1_VIBPA Q87HB1_VIBPA]
 
== Evolutionary Conservation ==
'''Crystal structure of the putative nitrite reductase NADPH (small subunit) oxidoreductase protein Q87HB1. Northeast Structural Genomics Consortium target VpR162'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c0/3c0d_consurf.spt"</scriptWhenChecked>
3C0D is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_rimd_2210633 Vibrio parahaemolyticus rimd 2210633]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C0D OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Vibrio parahaemolyticus rimd 2210633]]
  </jmolCheckbox>
[[Category: Abashidze, M.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c0d ConSurf].
[[Category: Acton, T B.]]
<div style="clear:both"></div>
[[Category: Baran, M C.]]
__TOC__
[[Category: Fang, Y.]]
</StructureSection>
[[Category: Hunt, J F.]]
[[Category: Large Structures]]
[[Category: Kuzin, A P.]]
[[Category: Vibrio parahaemolyticus RIMD 2210633]]
[[Category: Liu, J.]]
[[Category: Abashidze M]]
[[Category: Ma, L-C.]]
[[Category: Acton TB]]
[[Category: Montelione, G T.]]
[[Category: Baran MC]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Fang Y]]
[[Category: Owens, L.]]
[[Category: Hunt JF]]
[[Category: Rost, B.]]
[[Category: Kuzin AP]]
[[Category: Seetharaman, J.]]
[[Category: Liu J]]
[[Category: Tong, L.]]
[[Category: Ma L-C]]
[[Category: Vorobiev, S M.]]
[[Category: Montelione GT]]
[[Category: Wang, D.]]
[[Category: Owens L]]
[[Category: Xiao, R.]]
[[Category: Rost B]]
[[Category: nesg]]
[[Category: Seetharaman J]]
[[Category: northeast structural genomics consortium]]
[[Category: Tong L]]
[[Category: oxidoreductase]]
[[Category: Vorobiev SM]]
[[Category: protein structure initiative]]
[[Category: Wang D]]
[[Category: psi-2]]
[[Category: Xiao R]]
[[Category: q87hb1]]
[[Category: structural genomic]]
[[Category: structure]]
[[Category: vpr162]]
[[Category: xray]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:29:57 2008''
Retrieved from "https://proteopedia.org/3c0d"