3c4a: Difference between revisions

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[[Image:3c4a.jpg|left|200px]]


{{Structure
==Crystal structure of vioD hydroxylase in complex with FAD from Chromobacterium violaceum. Northeast Structural Genomics Consortium Target CvR158==
|PDB= 3c4a |SIZE=350|CAPTION= <scene name='initialview01'>3c4a</scene>, resolution 2.30&Aring;
<StructureSection load='3c4a' size='340' side='right'caption='[[3c4a]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
|SITE= <scene name='pdbsite=AC1:Fad+Binding+Site+For+Residue+A+401'>AC1</scene>
== Structural highlights ==
|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[3c4a]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Chrvo Chrvo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C4A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C4A FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
|GENE= vioD, CV_3271 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243365 Chromobacterium violaceum ATCC 12472])
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">vioD, CV_3271 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243365 CHRVO])</td></tr>
|RELATEDENTRY=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c4a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c4a OCA], [https://pdbe.org/3c4a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c4a RCSB], [https://www.ebi.ac.uk/pdbsum/3c4a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c4a ProSAT], [https://www.topsan.org/Proteins/NESGC/3c4a TOPSAN]</span></td></tr>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3c4a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c4a OCA], [http://www.ebi.ac.uk/pdbsum/3c4a PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3c4a RCSB]</span>
</table>
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Crystal structure of vioD hydroxylase in complex with FAD from Chromobacterium violaceum. Northeast Structural Genomics Consortium Target CvR158'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c4/3c4a_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
3C4A is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Chromobacterium_violaceum_atcc_12472 Chromobacterium violaceum atcc 12472]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C4A OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Chromobacterium violaceum atcc 12472]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c4a ConSurf].
[[Category: Acton, T B.]]
<div style="clear:both"></div>
[[Category: Baran, M C.]]
__TOC__
[[Category: Forouhar, F.]]
</StructureSection>
[[Category: Hunt, J F.]]
[[Category: Chrvo]]
[[Category: Janjua, H.]]
[[Category: Large Structures]]
[[Category: Maglaqui, M.]]
[[Category: Acton, T B]]
[[Category: Montelione, G T.]]
[[Category: Baran, M C]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Forouhar, F]]
[[Category: Neely, H.]]
[[Category: Hunt, J F]]
[[Category: Seetharaman, J.]]
[[Category: Janjua, H]]
[[Category: Tong, L.]]
[[Category: Maglaqui, M]]
[[Category: Wang, H.]]
[[Category: Montelione, G T]]
[[Category: Xiao, R.]]
[[Category: Structural genomic]]
[[Category: alpha-beta protein]]
[[Category: Neely, H]]
[[Category: antibiotic biosynthesis]]
[[Category: Seetharaman, J]]
[[Category: fad]]
[[Category: Tong, L]]
[[Category: flavoprotein]]
[[Category: Wang, H]]
[[Category: nesg]]
[[Category: Xiao, R]]
[[Category: northeast structural genomics consortium]]
[[Category: Alpha-beta protein]]
[[Category: oxidoreductase]]
[[Category: Antibiotic biosynthesis]]
[[Category: protein structure initiative]]
[[Category: Fad]]
[[Category: psi-2]]
[[Category: Flavoprotein]]
[[Category: structural genomic]]
[[Category: Nesg]]
 
[[Category: Oxidoreductase]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:30:29 2008''
[[Category: PSI, Protein structure initiative]]
Retrieved from "https://proteopedia.org/3c4a"