3c3j: Difference between revisions

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[[Image:3c3j.jpg|left|200px]]


{{Structure
==Crystal structure of tagatose-6-phosphate ketose/aldose isomerase from Escherichia coli==
|PDB= 3c3j |SIZE=350|CAPTION= <scene name='initialview01'>3c3j</scene>, resolution 1.80&Aring;
<StructureSection load='3c3j' size='340' side='right'caption='[[3c3j]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[3c3j]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C3J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C3J FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
|GENE= agaS, yraB, b3136, JW3105 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 Escherichia coli K12])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c3j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c3j OCA], [https://pdbe.org/3c3j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c3j RCSB], [https://www.ebi.ac.uk/pdbsum/3c3j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c3j ProSAT], [https://www.topsan.org/Proteins/MCSG/3c3j TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3c3j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c3j OCA], [http://www.ebi.ac.uk/pdbsum/3c3j PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3c3j RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/AGAS_ECOLI AGAS_ECOLI] May be a tagatose-6-phosphate ketose/aldose isomerase (By similarity).
 
== Evolutionary Conservation ==
'''Crystal structure of tagatose-6-phosphate ketose/aldose isomerase from Escherichia coli'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c3/3c3j_consurf.spt"</scriptWhenChecked>
3C3J is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k12 Escherichia coli k12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C3J OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Escherichia coli k12]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Single protein]]
  </jmolCheckbox>
[[Category: Edwards, A M.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c3j ConSurf].
[[Category: Egorova, O.]]
<div style="clear:both"></div>
[[Category: Joachimiak, A.]]
__TOC__
[[Category: MCSG, Midwest Center for Structural Genomics.]]
</StructureSection>
[[Category: Savchenko, A.]]
[[Category: Escherichia coli K-12]]
[[Category: Skarina, T.]]
[[Category: Large Structures]]
[[Category: Zhang, R.]]
[[Category: Edwards AM]]
[[Category: mcsg]]
[[Category: Egorova O]]
[[Category: midwest center for structural genomic]]
[[Category: Joachimiak A]]
[[Category: protein structure initiative]]
[[Category: Savchenko A]]
[[Category: psi]]
[[Category: Skarina T]]
[[Category: structural genomic]]
[[Category: Zhang R]]
[[Category: tagatose-6-phosphate ketose/aldose isomerase]]
 
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