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[[Image:3c85.jpg|left|200px]]


{{Structure
==Crystal structure of TrkA domain of putative glutathione-regulated potassium-efflux KefB from Vibrio parahaemolyticus==
|PDB= 3c85 |SIZE=350|CAPTION= <scene name='initialview01'>3c85</scene>, resolution 1.90&Aring;
<StructureSection load='3c85' size='340' side='right'caption='[[3c85]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
|SITE= <scene name='pdbsite=AC1:So4+Binding+Site+For+Residue+B+180'>AC1</scene>, <scene name='pdbsite=AC2:So4+Binding+Site+For+Residue+A+180'>AC2</scene> and <scene name='pdbsite=AC3:Amp+Binding+Site+For+Residue+C+180'>AC3</scene>
== Structural highlights ==
|LIGAND= <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
<table><tr><td colspan='2'>[[3c85]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_RIMD_2210633 Vibrio parahaemolyticus RIMD 2210633]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C85 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C85 FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
|GENE= VP0827 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223926 Vibrio parahaemolyticus RIMD 2210633])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c85 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c85 OCA], [https://pdbe.org/3c85 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c85 RCSB], [https://www.ebi.ac.uk/pdbsum/3c85 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c85 ProSAT], [https://www.topsan.org/Proteins/MCSG/3c85 TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3c85 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c85 OCA], [http://www.ebi.ac.uk/pdbsum/3c85 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3c85 RCSB]</span>
== Evolutionary Conservation ==
}}
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
'''Crystal structure of TrkA domain of putative glutathione-regulated potassium-efflux KefB from Vibrio parahaemolyticus'''
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c8/3c85_consurf.spt"</scriptWhenChecked>
 
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
==About this Structure==
    <text>to colour the structure by Evolutionary Conservation</text>
3C85 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_rimd_2210633 Vibrio parahaemolyticus rimd 2210633]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C85 OCA].  
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c85 ConSurf].
[[Category: Vibrio parahaemolyticus rimd 2210633]]
<div style="clear:both"></div>
[[Category: Abdullah, J.]]
__TOC__
[[Category: Joachimiak, A.]]
</StructureSection>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Large Structures]]
[[Category: Wu, R.]]
[[Category: Vibrio parahaemolyticus RIMD 2210633]]
[[Category: mcsg]]
[[Category: Abdullah J]]
[[Category: midwest center for structural genomic]]
[[Category: Joachimiak A]]
[[Category: protein structure initiative]]
[[Category: Wu R]]
[[Category: psi-2]]
[[Category: putative glutathione-regulated potassium-efflux kefb]]
[[Category: structural genomic]]
[[Category: transmembrane]]
[[Category: transport]]
[[Category: transport protein]]
[[Category: trka domain]]
[[Category: vibrio parahaemolyticus]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:31:00 2008''

Latest revision as of 01:39, 21 November 2024

Crystal structure of TrkA domain of putative glutathione-regulated potassium-efflux KefB from Vibrio parahaemolyticus

3c85, resolution 1.90Å

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