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[[Image:3cdh.jpg|left|200px]]


{{Structure
==Crystal structure of the MarR family transcriptional regulator SPO1453 from Silicibacter pomeroyi DSS-3==
|PDB= 3cdh |SIZE=350|CAPTION= <scene name='initialview01'>3cdh</scene>, resolution 2.69&Aring;
<StructureSection load='3cdh' size='340' side='right'caption='[[3cdh]], [[Resolution|resolution]] 2.69&Aring;' scene=''>
|SITE= <scene name='pdbsite=AC1:So4+Binding+Site+For+Residue+A+201'>AC1</scene>, <scene name='pdbsite=AC2:So4+Binding+Site+For+Residue+A+202'>AC2</scene>, <scene name='pdbsite=AC3:So4+Binding+Site+For+Residue+A+203'>AC3</scene>, <scene name='pdbsite=AC4:So4+Binding+Site+For+Residue+A+204'>AC4</scene>, <scene name='pdbsite=AC5:So4+Binding+Site+For+Residue+B+205'>AC5</scene>, <scene name='pdbsite=AC6:So4+Binding+Site+For+Residue+A+206'>AC6</scene>, <scene name='pdbsite=AC7:Gol+Binding+Site+For+Residue+A+207'>AC7</scene>, <scene name='pdbsite=AC8:Gol+Binding+Site+For+Residue+B+208'>AC8</scene> and <scene name='pdbsite=AC9:Gol+Binding+Site+For+Residue+B+209'>AC9</scene>
== Structural highlights ==
|LIGAND= <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
<table><tr><td colspan='2'>[[3cdh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruegeria_pomeroyi_DSS-3 Ruegeria pomeroyi DSS-3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CDH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CDH FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.69&#8491;</td></tr>
|GENE= SPO1453 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2 Bacteria])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cdh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cdh OCA], [https://pdbe.org/3cdh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cdh RCSB], [https://www.ebi.ac.uk/pdbsum/3cdh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cdh ProSAT], [https://www.topsan.org/Proteins/MCSG/3cdh TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cdh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cdh OCA], [http://www.ebi.ac.uk/pdbsum/3cdh PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3cdh RCSB]</span>
== Evolutionary Conservation ==
}}
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
'''Crystal structure of the MarR family transcriptional regulator SPO1453 from Silicibacter pomeroyi DSS-3'''
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cd/3cdh_consurf.spt"</scriptWhenChecked>
 
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
==About this Structure==
    <text>to colour the structure by Evolutionary Conservation</text>
3CDH is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CDH OCA].  
  </jmolCheckbox>
[[Category: Bacteria]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cdh ConSurf].
[[Category: Single protein]]
<div style="clear:both"></div>
[[Category: Joachimiak, A.]]
__TOC__
[[Category: Keigher, L.]]
</StructureSection>
[[Category: Kim, Y.]]
[[Category: Large Structures]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Ruegeria pomeroyi DSS-3]]
[[Category: Volkart, L.]]
[[Category: Joachimiak A]]
[[Category: dna-binding]]
[[Category: Keigher L]]
[[Category: helix-turn-hleix]]
[[Category: Kim Y]]
[[Category: marr]]
[[Category: Volkart L]]
[[Category: mcsg]]
[[Category: midwest center for structural genomic]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: structural genomic]]
[[Category: transcription regulation]]
[[Category: transcription regulator]]
[[Category: transcriptional regulator]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:31:46 2008''

Latest revision as of 01:40, 21 November 2024

Crystal structure of the MarR family transcriptional regulator SPO1453 from Silicibacter pomeroyi DSS-3

3cdh, resolution 2.69Å

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