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[[Image:3cdk.jpg|left|200px]]


{{Structure
==Crystal structure of the co-expressed succinyl-CoA transferase A and B complex from Bacillus subtilis==
|PDB= 3cdk |SIZE=350|CAPTION= <scene name='initialview01'>3cdk</scene>, resolution 2.59&Aring;
<StructureSection load='3cdk' size='340' side='right'caption='[[3cdk]], [[Resolution|resolution]] 2.59&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[3cdk]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CDK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CDK FirstGlance]. <br>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/3-oxoacid_CoA-transferase 3-oxoacid CoA-transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.8.3.5 2.8.3.5] </span>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.59&#8491;</td></tr>
|GENE= scoA, yxjD, BSU38990, N15K ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 Bacillus subtilis]), scoB, yxjE, BSU38980, N15L ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 Bacillus subtilis])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cdk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cdk OCA], [https://pdbe.org/3cdk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cdk RCSB], [https://www.ebi.ac.uk/pdbsum/3cdk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cdk ProSAT], [https://www.topsan.org/Proteins/MCSG/3cdk TOPSAN]</span></td></tr>
|DOMAIN=
</table>
|RELATEDENTRY=
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cdk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cdk OCA], [http://www.ebi.ac.uk/pdbsum/3cdk PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3cdk RCSB]</span>
[https://www.uniprot.org/uniprot/SCOA_BACSU SCOA_BACSU]
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Crystal structure of the co-expressed succinyl-CoA transferase A and B complex from Bacillus subtilis'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cd/3cdk_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
3CDK is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CDK OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: 3-oxoacid CoA-transferase]]
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cdk ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
[[Category: Protein complex]]
[[Category: Large Structures]]
[[Category: Donnelly, M.]]
[[Category: Donnelly M]]
[[Category: Eschenfeldt, W.]]
[[Category: Eschenfeldt W]]
[[Category: Joachimiak, A.]]
[[Category: Joachimiak A]]
[[Category: Kim, Y.]]
[[Category: Kim Y]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Stols L]]
[[Category: Stols, L.]]
[[Category: Zhou M]]
[[Category: Zhou, M.]]
[[Category: co-expressed complex]]
[[Category: hetero-tetramer]]
[[Category: mcsg]]
[[Category: midwest center for structural genomic]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: structural genomic]]
[[Category: transferase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:31:50 2008''

Latest revision as of 12:26, 30 August 2023

Crystal structure of the co-expressed succinyl-CoA transferase A and B complex from Bacillus subtilis

3cdk, resolution 2.59Å

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