3ck5: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(14 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3ck5.jpg|left|200px]]


{{Structure
==Crystal structure of a racemase from Streptomyces coelicolor A3(2) with bound magnesium==
|PDB= 3ck5 |SIZE=350|CAPTION= <scene name='initialview01'>3ck5</scene>, resolution 2.30&Aring;
<StructureSection load='3ck5' size='340' side='right'caption='[[3ck5]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
|SITE= <scene name='pdbsite=AC1:Mg+Binding+Site+For+Residue+A+400'>AC1</scene>, <scene name='pdbsite=AC2:Mg+Binding+Site+For+Residue+B+400'>AC2</scene>, <scene name='pdbsite=AC3:Mg+Binding+Site+For+Residue+C+400'>AC3</scene> and <scene name='pdbsite=AC4:Mg+Binding+Site+For+Residue+D+400'>AC4</scene>
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CK5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CK5 FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
|GENE= SCO3480, SCE65.16c ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2 Bacteria])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03316 MR_like], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4948 COG4948]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ck5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ck5 OCA], [https://pdbe.org/3ck5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ck5 RCSB], [https://www.ebi.ac.uk/pdbsum/3ck5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ck5 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3ck5 TOPSAN]</span></td></tr>
|RELATEDENTRY=[[2ovl|2OVL]]
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ck5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ck5 OCA], [http://www.ebi.ac.uk/pdbsum/3ck5 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3ck5 RCSB]</span>
== Evolutionary Conservation ==
}}
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
'''Crystal structure of a racemase from Streptomyces coelicolor A3(2) with bound magnesium'''
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ck/3ck5_consurf.spt"</scriptWhenChecked>
 
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
==About this Structure==
    <text>to colour the structure by Evolutionary Conservation</text>
3CK5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CK5 OCA].
  </jmolCheckbox>
[[Category: Bacteria]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ck5 ConSurf].
[[Category: Single protein]]
<div style="clear:both"></div>
[[Category: Burley, S K.]]
__TOC__
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
</StructureSection>
[[Category: Rao, K N.]]
[[Category: Large Structures]]
[[Category: Swaminathan, S.]]
[[Category: Burley SK]]
[[Category: 9301a]]
[[Category: Rao KN]]
[[Category: crystal structure]]
[[Category: Swaminathan S]]
[[Category: isomerase]]
[[Category: magnesium]]
[[Category: new york structural genomix research consortium]]
[[Category: nysgxrc]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: racemase]]
[[Category: streptomyces coelicolor a3(2)]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:32:32 2008''
Retrieved from "https://proteopedia.org/3ck5"