3mvc: Difference between revisions

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==High resolution crystal structure of the heme domain of GLB-6 from C. elegans==
==High resolution crystal structure of the heme domain of GLB-6 from C. elegans==
<StructureSection load='3mvc' size='340' side='right' caption='[[3mvc]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
<StructureSection load='3mvc' size='340' side='right'caption='[[3mvc]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3mvc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Caeel Caeel]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MVC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MVC FirstGlance]. <br>
<table><tr><td colspan='2'>[[3mvc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MVC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MVC FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene>, <scene name='pdbligand=PR:PRASEODYMIUM+ION'>PR</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.401&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">C18C4.9, glb-6 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6239 CAEEL])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene>, <scene name='pdbligand=PR:PRASEODYMIUM+ION'>PR</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mvc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mvc OCA], [http://pdbe.org/3mvc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3mvc RCSB], [http://www.ebi.ac.uk/pdbsum/3mvc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3mvc ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mvc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mvc OCA], [https://pdbe.org/3mvc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mvc RCSB], [https://www.ebi.ac.uk/pdbsum/3mvc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mvc ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/GLOB6_CAEEL GLOB6_CAEEL] May play a role as physiological sensor for oxygen via redox signaling and/or electron transport.<ref>PMID:20518498</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mv/3mvc_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mv/3mvc_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Caeel]]
[[Category: Caenorhabditis elegans]]
[[Category: Jr, C Olea]]
[[Category: Large Structures]]
[[Category: Jr, M A.Herzik]]
[[Category: Herzik Jr MA]]
[[Category: Marletta, M A]]
[[Category: Marletta MA]]
[[Category: Tran, R]]
[[Category: Olea Jr C]]
[[Category: Winter, M B]]
[[Category: Tran R]]
[[Category: Yoon, J]]
[[Category: Winter MB]]
[[Category: C. elegan]]
[[Category: Yoon J]]
[[Category: Electron transport]]
[[Category: Globin]]
[[Category: Heme-binding protein]]
[[Category: Oxygen sensor]]
[[Category: Oxygen transport]]
Retrieved from "https://proteopedia.org/3mvc"