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New page: left|200px {{Structure |PDB= 2eqz |SIZE=350|CAPTION= <scene name='initialview01'>2eqz</scene> |SITE= |LIGAND= |ACTIVITY= |GENE= HMGB3 ([http://www.ncbi.nlm.nih.gov/...
 
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[[Image:2eqz.jpg|left|200px]]


{{Structure
==Solution structure of the first HMG-box domain from high mobility group protein B3==
|PDB= 2eqz |SIZE=350|CAPTION= <scene name='initialview01'>2eqz</scene>
<StructureSection load='2eqz' size='340' side='right'caption='[[2eqz]]' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[2eqz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EQZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EQZ FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
|GENE= HMGB3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eqz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eqz OCA], [https://pdbe.org/2eqz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eqz RCSB], [https://www.ebi.ac.uk/pdbsum/2eqz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eqz ProSAT], [https://www.topsan.org/Proteins/RSGI/2eqz TOPSAN]</span></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01390 HMGB-UBF_HMG-box]</span>
</table>
|RELATEDENTRY=
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2eqz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eqz OCA], [http://www.ebi.ac.uk/pdbsum/2eqz PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2eqz RCSB]</span>
[https://www.uniprot.org/uniprot/HMGB3_HUMAN HMGB3_HUMAN] Binds preferentially single-stranded DNA and unwinds double stranded DNA (By similarity).
}}
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eq/2eqz_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2eqz ConSurf].
<div style="clear:both"></div>


'''Solution structure of the first HMG-box domain from high mobility group protein B3'''
==See Also==
 
*[[High mobility group protein|High mobility group protein]]
 
__TOC__
==About this Structure==
</StructureSection>
2EQZ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EQZ OCA].
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Hayahsi, F.]]
[[Category: Hayahsi F]]
[[Category: Kurosaki, C.]]
[[Category: Kurosaki C]]
[[Category: Qin, X R.]]
[[Category: Qin XR]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Yokoyama S]]
[[Category: Yokoyama, S.]]
[[Category: Yoshida M]]
[[Category: Yoshida, M.]]
[[Category: high mobility group protein b3]]
[[Category: hmg-box domain]]
[[Category: mobility group protein 2a]]
[[Category: mobility group protein 4]]
[[Category: national project on protein structural and functional analyse]]
[[Category: nppsfa]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: structural genomic]]
[[Category: transcription]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr  2 11:57:12 2008''

Latest revision as of 18:55, 29 May 2024

Solution structure of the first HMG-box domain from high mobility group protein B3

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