3chv: Difference between revisions

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New page: left|200px {{Structure |PDB= 3chv |SIZE=350|CAPTION= <scene name='initialview01'>3chv</scene>, resolution 1.450Å |SITE= <scene name='pdbsite=AC1:Zn+Binding+Site+...
 
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[[Image:3chv.jpg|left|200px]]


{{Structure
==CRYSTAL STRUCTURE OF a prokaryotic domain of unknown function (DUF849) member (SPOA0042) FROM SILICIBACTER POMEROYI DSS-3 AT 1.45 A RESOLUTION==
|PDB= 3chv |SIZE=350|CAPTION= <scene name='initialview01'>3chv</scene>, resolution 1.450&Aring;
<StructureSection load='3chv' size='340' side='right'caption='[[3chv]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
|SITE= <scene name='pdbsite=AC1:Zn+Binding+Site+For+Residue+A+301'>AC1</scene>, <scene name='pdbsite=AC2:Zn+Binding+Site+For+Residue+A+302'>AC2</scene>, <scene name='pdbsite=AC3:Cl+Binding+Site+For+Residue+A+303'>AC3</scene> and <scene name='pdbsite=AC4:Cl+Binding+Site+For+Residue+A+304'>AC4</scene>
== Structural highlights ==
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
<table><tr><td colspan='2'>[[3chv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruegeria_pomeroyi_DSS-3 Ruegeria pomeroyi DSS-3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CHV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CHV FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
|GENE= YP_164873.1, SPOA0042 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2 Bacteria])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3chv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3chv OCA], [https://pdbe.org/3chv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3chv RCSB], [https://www.ebi.ac.uk/pdbsum/3chv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3chv ProSAT], [https://www.topsan.org/Proteins/JCSG/3chv TOPSAN]</span></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam05853 DUF849]</span>
</table>
|RELATEDENTRY=
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3chv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3chv OCA], [http://www.ebi.ac.uk/pdbsum/3chv PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3chv RCSB]</span>
[https://www.uniprot.org/uniprot/Q6SJB6_9RHOB Q6SJB6_9RHOB]
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Crystal structure of prokaryotic domain of unknown function (DUF849) with a TIM barrel fold (YP_164873.1) from Silicibacter pomeroyi DSS-3 at 1.45 A resolution'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ch/3chv_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
3CHV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CHV OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Bacteria]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3chv ConSurf].
[[Category: JCSG, Joint Center for Structural Genomics.]]
<div style="clear:both"></div>
[[Category: jcsg]]
__TOC__
[[Category: joint center for structural genomic]]
</StructureSection>
[[Category: plasmid]]
[[Category: Large Structures]]
[[Category: prokaryotic domain of unknown function (duf849) with a tim barrel fold]]
[[Category: Ruegeria pomeroyi DSS-3]]
[[Category: prokaryotic protein of unknown function (duf849)]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: structural genomic]]
[[Category: unknown function]]
[[Category: yp_164873 1]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr  2 12:00:09 2008''

Latest revision as of 11:30, 1 February 2023

CRYSTAL STRUCTURE OF a prokaryotic domain of unknown function (DUF849) member (SPOA0042) FROM SILICIBACTER POMEROYI DSS-3 AT 1.45 A RESOLUTION

3chv, resolution 1.45Å

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