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New page: left|200px {{Structure |PDB= 3cjy |SIZE=350|CAPTION= <scene name='initialview01'>3cjy</scene>, resolution 1.700Å |SITE= <scene name='pdbsite=AC1:Ca+Binding+Site+...
 
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[[Image:3cjy.jpg|left|200px]]


{{Structure
==Crystal structure of putative thioesterase (YP_496845.1) from Novosphingobium aromaticivorans DSM 12444 at 1.70 A resolution==
|PDB= 3cjy |SIZE=350|CAPTION= <scene name='initialview01'>3cjy</scene>, resolution 1.700&Aring;
<StructureSection load='3cjy' size='340' side='right'caption='[[3cjy]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
|SITE= <scene name='pdbsite=AC1:Ca+Binding+Site+For+Residue+A+259'>AC1</scene>, <scene name='pdbsite=AC2:Pge+Binding+Site+For+Residue+A+260'>AC2</scene>, <scene name='pdbsite=AC3:Gol+Binding+Site+For+Residue+A+261'>AC3</scene>, <scene name='pdbsite=AC4:Gol+Binding+Site+For+Residue+A+262'>AC4</scene>, <scene name='pdbsite=AC5:Gol+Binding+Site+For+Residue+A+263'>AC5</scene>, <scene name='pdbsite=AC6:Gol+Binding+Site+For+Residue+A+264'>AC6</scene>, <scene name='pdbsite=AC7:Peg+Binding+Site+For+Residue+A+265'>AC7</scene> and <scene name='pdbsite=AC8:Peg+Binding+Site+For+Residue+A+266'>AC8</scene>
== Structural highlights ==
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>
<table><tr><td colspan='2'>[[3cjy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Novosphingobium_aromaticivorans_DSM_12444 Novosphingobium aromaticivorans DSM 12444]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CJY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CJY FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
|GENE= YP_496845.1, Saro_1571 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=279238 Novosphingobium aromaticivorans DSM 12444])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cjy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cjy OCA], [https://pdbe.org/3cjy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cjy RCSB], [https://www.ebi.ac.uk/pdbsum/3cjy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cjy ProSAT], [https://www.topsan.org/Proteins/JCSG/3cjy TOPSAN]</span></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03444 Thioesterase_II_repeat1], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03445 Thioesterase_II_repeat2], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1946 TesB]</span>
</table>
|RELATEDENTRY=
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cjy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cjy OCA], [http://www.ebi.ac.uk/pdbsum/3cjy PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3cjy RCSB]</span>
[https://www.uniprot.org/uniprot/Q2G812_NOVAD Q2G812_NOVAD]
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Crystal structure of putative thioesterase (YP_496845.1) from Novosphingobium aromaticivorans DSM 12444 at 1.70 A resolution'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cj/3cjy_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
3CJY is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Novosphingobium_aromaticivorans_dsm_12444 Novosphingobium aromaticivorans dsm 12444]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CJY OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Novosphingobium aromaticivorans dsm 12444]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cjy ConSurf].
[[Category: JCSG, Joint Center for Structural Genomics.]]
<div style="clear:both"></div>
[[Category: hydrolase]]
__TOC__
[[Category: jcsg]]
</StructureSection>
[[Category: joint center for structural genomic]]
[[Category: Large Structures]]
[[Category: protein structure initiative]]
[[Category: Novosphingobium aromaticivorans DSM 12444]]
[[Category: psi-2]]
[[Category: putative thioesterase]]
[[Category: structural genomic]]
[[Category: yp_496845 1]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr  2 12:00:13 2008''
Retrieved from "https://proteopedia.org/3cjy"