6jfq: Difference between revisions
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==K2U bound crystal structure of class II peptide deformylase from methicillin resistant Staphylococcus aureus== | |||
<StructureSection load='6jfq' size='340' side='right'caption='[[6jfq]], [[Resolution|resolution]] 2.20Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[6jfq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6JFQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6JFQ FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> | |||
[[Category: | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K2U:(3~{R},4~{R})-4-oxidanyl-3-(phenylmethyl)-4-(phenylmethylsulfanyl)butanoic+acid'>K2U</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr> | ||
[[Category: | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6jfq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6jfq OCA], [https://pdbe.org/6jfq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6jfq RCSB], [https://www.ebi.ac.uk/pdbsum/6jfq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6jfq ProSAT]</span></td></tr> | ||
[[Category: Ho | </table> | ||
[[Category: Kang | == Function == | ||
[https://www.uniprot.org/uniprot/DEF_STAAU DEF_STAAU] Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (By similarity).[HAMAP-Rule:MF_00163] | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Staphylococcus aureus]] | |||
[[Category: Ho TH]] | |||
[[Category: Kang LW]] | |||
[[Category: Lee IH]] | |||
Latest revision as of 10:08, 22 November 2023
K2U bound crystal structure of class II peptide deformylase from methicillin resistant Staphylococcus aureus
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