2yv5: Difference between revisions
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==Crystal structure of Yjeq from Aquifex aeolicus== | |||
<StructureSection load='2yv5' size='340' side='right'caption='[[2yv5]], [[Resolution|resolution]] 1.90Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2yv5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YV5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YV5 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yv5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yv5 OCA], [https://pdbe.org/2yv5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yv5 RCSB], [https://www.ebi.ac.uk/pdbsum/2yv5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yv5 ProSAT], [https://www.topsan.org/Proteins/RSGI/2yv5 TOPSAN]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/RSGA_AQUAE RSGA_AQUAE] One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit.[HAMAP-Rule:MF_01820] | |||
== Evolutionary Conservation == | |||
== | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yv/2yv5_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yv5 ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Aquifex aeolicus]] | [[Category: Aquifex aeolicus]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Hanawa-Suetsugu | [[Category: Hanawa-Suetsugu K]] | ||
[[Category: Kaminishi | [[Category: Kaminishi T]] | ||
[[Category: Shirouzu M]] | |||
[[Category: Shirouzu | [[Category: Takemoto C]] | ||
[[Category: Takemoto | [[Category: Terada T]] | ||
[[Category: Terada | [[Category: Wang H]] | ||
[[Category: Wang | [[Category: Yokoyama S]] | ||
[[Category: Yokoyama | |||
Latest revision as of 08:07, 23 October 2024
Crystal structure of Yjeq from Aquifex aeolicus
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