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<StructureSection load='4xqa' size='340' side='right'caption='[[4xqa]], [[Resolution|resolution]] 1.41&Aring;' scene=''>
<StructureSection load='4xqa' size='340' side='right'caption='[[4xqa]], [[Resolution|resolution]] 1.41&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4xqa]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Adenovirus_type_37 Adenovirus type 37]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XQA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4XQA FirstGlance]. <br>
<table><tr><td colspan='2'>[[4xqa]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_adenovirus_D37 Human adenovirus D37]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XQA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4XQA FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=423:(1-{2-[BIS(2-{4-[({(6R)-5-(ACETYLAMINO)-3,5-DIDEOXY-6-[(1R,2R)-1,2,3-TRIHYDROXYPROPYL]-BETA-L-THREO-HEX-2-ULOPYRANONOSYL}OXY)METHYL]-1H-1,2,3-TRIAZOL-1-YL}ETHYL)AMINO]ETHYL}-1H-1,2,3-TRIAZOL-4-YL)METHYL+(6R)-5-(ACETYLAMINO)-3,5-DIDEOXY-6-[(1R,2R)-1,2,3-TRIHYDROXYPROPYL]-BETA-L-THREO-HEX-2-ULOPYRANOSIDONIC+ACID'>423</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4072&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4k6t|4k6t]], [[4k6u|4k6u]], [[4k6v|4k6v]], [[4k6w|4k6w]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=423:(1-{2-[BIS(2-{4-[({(6R)-5-(ACETYLAMINO)-3,5-DIDEOXY-6-[(1R,2R)-1,2,3-TRIHYDROXYPROPYL]-BETA-L-THREO-HEX-2-ULOPYRANONOSYL}OXY)METHYL]-1H-1,2,3-TRIAZOL-1-YL}ETHYL)AMINO]ETHYL}-1H-1,2,3-TRIAZOL-4-YL)METHYL+(6R)-5-(ACETYLAMINO)-3,5-DIDEOXY-6-[(1R,2R)-1,2,3-TRIHYDROXYPROPYL]-BETA-L-THREO-HEX-2-ULOPYRANOSIDONIC+ACID'>423</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">L5 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=52275 Adenovirus type 37])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4xqa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xqa OCA], [https://pdbe.org/4xqa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4xqa RCSB], [https://www.ebi.ac.uk/pdbsum/4xqa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4xqa ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4xqa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xqa OCA], [http://pdbe.org/4xqa PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4xqa RCSB], [http://www.ebi.ac.uk/pdbsum/4xqa PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4xqa ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q64823_9ADEN Q64823_9ADEN]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Adenovirus type 37]]
[[Category: Human adenovirus D37]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Liaci, A M]]
[[Category: Liaci AM]]
[[Category: Stehle, T]]
[[Category: Stehle T]]
[[Category: Adenovirus]]
[[Category: Carbohydrate mimic]]
[[Category: Fiber knob]]
[[Category: Multivalent ligand]]
[[Category: Protein carbohydrate interaction]]
[[Category: Sialic acid]]
[[Category: Viral protein]]