5nfo: Difference between revisions

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<StructureSection load='5nfo' size='340' side='right'caption='[[5nfo]], [[Resolution|resolution]] 2.17&Aring;' scene=''>
<StructureSection load='5nfo' size='340' side='right'caption='[[5nfo]], [[Resolution|resolution]] 2.17&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5nfo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NFO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5NFO FirstGlance]. <br>
<table><tr><td colspan='2'>[[5nfo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NFO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5NFO FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.173&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5nfn|5nfn]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">JMJD7 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5nfo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nfo OCA], [https://pdbe.org/5nfo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5nfo RCSB], [https://www.ebi.ac.uk/pdbsum/5nfo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5nfo ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5nfo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nfo OCA], [http://pdbe.org/5nfo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5nfo RCSB], [http://www.ebi.ac.uk/pdbsum/5nfo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5nfo ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/JMJD7_HUMAN JMJD7_HUMAN]


==See Also==
==See Also==
*[[Jumonji domain-containing protein|Jumonji domain-containing protein]]
*[[Jumonji domain-containing protein 3D structures|Jumonji domain-containing protein 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Human]]
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Chowdhury, R]]
[[Category: Chowdhury R]]
[[Category: Markolovic, S]]
[[Category: Markolovic S]]
[[Category: Schofield, C J]]
[[Category: Schofield CJ]]
[[Category: 2-oxoglutarate]]
[[Category: Cancer]]
[[Category: Development]]
[[Category: Developmentally regulated gtp binding protein]]
[[Category: Dimerisation]]
[[Category: Dioxygenase]]
[[Category: Drg1]]
[[Category: Drg2]]
[[Category: Dsbh]]
[[Category: Facial triad]]
[[Category: Helix-loop-helix-beta]]
[[Category: Hydroxylation]]
[[Category: Hypoxia]]
[[Category: Iron]]
[[Category: Jmjc]]
[[Category: Jmjc demethylase]]
[[Category: Jmjc domain]]
[[Category: Jmjc domain-containing protein 7]]
[[Category: Jmjc hydroxylase]]
[[Category: Jmjd7]]
[[Category: Kdm]]
[[Category: Lysyl hydroxylation]]
[[Category: Metal-binding]]
[[Category: Non-heme]]
[[Category: Nucleic acid-binding]]
[[Category: Oxidoreductase]]
[[Category: Oxygenase]]
[[Category: Post-translational modification]]
[[Category: Ptm]]
[[Category: Ribosome biogenesis]]
[[Category: Trafac gtpase]]
[[Category: Translation]]
[[Category: Translation factor]]

Latest revision as of 12:54, 15 November 2023

Human JMJD7 in complex with Mn and 2OG in the P21212 form

5nfo, resolution 2.17Å

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