5fki: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:


==Pseudorabies virus (PrV) nuclear egress complex proteins fitted as a hexameric lattice into a sub-tomogram average derived from focused- ion beam milled lamellae electron cryo-microscopic data==
==Pseudorabies virus (PrV) nuclear egress complex proteins fitted as a hexameric lattice into a sub-tomogram average derived from focused- ion beam milled lamellae electron cryo-microscopic data==
<StructureSection load='5fki' size='340' side='right'caption='[[5fki]], [[Resolution|resolution]] 35.00&Aring;' scene=''>
<SX load='5fki' size='340' side='right' viewer='molstar' caption='[[5fki]], [[Resolution|resolution]] 35.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5fki]] is a 84 chain structure with sequence from [http://en.wikipedia.org/wiki/Alphaherpesvirus_pseudorabies_virus_prv Alphaherpesvirus pseudorabies virus prv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FKI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5FKI FirstGlance]. <br>
<table><tr><td colspan='2'>[[5fki]] is a 84 chain structure with sequence from [https://en.wikipedia.org/wiki/Suid_alphaherpesvirus_1 Suid alphaherpesvirus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FKI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5FKI FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 35&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">UL31 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10345 Alphaherpesvirus pseudorabies virus PRV]), UL34 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10345 Alphaherpesvirus pseudorabies virus PRV])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5fki FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fki OCA], [https://pdbe.org/5fki PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5fki RCSB], [https://www.ebi.ac.uk/pdbsum/5fki PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5fki ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5fki FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fki OCA], [http://pdbe.org/5fki PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5fki RCSB], [http://www.ebi.ac.uk/pdbsum/5fki PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5fki ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/G3G955_SUHV G3G955_SUHV]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 22:
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</SX>
[[Category: Alphaherpesvirus pseudorabies virus prv]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Antonin, W]]
[[Category: Suid alphaherpesvirus 1]]
[[Category: Dent, K C]]
[[Category: Antonin W]]
[[Category: Gruenewald, K]]
[[Category: Dent KC]]
[[Category: Hagen, C]]
[[Category: Gruenewald K]]
[[Category: Mettenleiter, T C]]
[[Category: Hagen C]]
[[Category: Mordehai, T Zeev Ben]]
[[Category: Mettenleiter TC]]
[[Category: Vasishtan, D]]
[[Category: Vasishtan D]]
[[Category: Alpha-herpesvirinae]]
[[Category: Zeev Ben Mordehai T]]
[[Category: Fib-sem]]
[[Category: Focused ion beam milling]]
[[Category: Herpesvirus simplex]]
[[Category: Hsv-1]]
[[Category: Inner nuclear membrane]]
[[Category: Nuclear egress complex]]
[[Category: Nuclear envelope]]
[[Category: Nucleo-cytoplasmic transport]]
[[Category: Nucleoplasmic reticulum]]
[[Category: Prv]]
[[Category: Pseudorabies virus]]
[[Category: Ryofib]]
[[Category: Vesicle transport]]
[[Category: Viral protein]]