5abo: Difference between revisions

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<StructureSection load='5abo' size='340' side='right'caption='[[5abo]], [[Resolution|resolution]] 1.09&Aring;' scene=''>
<StructureSection load='5abo' size='340' side='right'caption='[[5abo]], [[Resolution|resolution]] 1.09&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5abo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Boletus_of_the_steppes Boletus of the steppes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ABO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ABO FirstGlance]. <br>
<table><tr><td colspan='2'>[[5abo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pleurotus_eryngii Pleurotus eryngii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ABO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ABO FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.095&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5abn|5abn]], [[5abq|5abq]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Versatile_peroxidase Versatile peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.16 1.11.1.16] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5abo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5abo OCA], [https://pdbe.org/5abo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5abo RCSB], [https://www.ebi.ac.uk/pdbsum/5abo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5abo ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5abo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5abo OCA], [http://pdbe.org/5abo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5abo RCSB], [http://www.ebi.ac.uk/pdbsum/5abo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5abo ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/VPL2_PLEER VPL2_PLEER]] A versatile ligninolytic peroxidase that combines the substrate specificity characteristics of the two other ligninolytic peroxidases, manganese peroxidase and lignin peroxidase.<ref>PMID:9987124</ref>
[https://www.uniprot.org/uniprot/VPL2_PLEER VPL2_PLEER] A versatile ligninolytic peroxidase that combines the substrate specificity characteristics of the two other ligninolytic peroxidases, manganese peroxidase and lignin peroxidase.<ref>PMID:9987124</ref>  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Boletus of the steppes]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Versatile peroxidase]]
[[Category: Pleurotus eryngii]]
[[Category: Medrano, F J]]
[[Category: Medrano FJ]]
[[Category: Romero, A]]
[[Category: Romero A]]
[[Category: Electron transfer]]
[[Category: Heme]]
[[Category: Hydrogen peroxide]]
[[Category: Iron]]
[[Category: Lignin degradation]]
[[Category: Lignin peroxidase]]
[[Category: Manganese]]
[[Category: Manganese peroxidase]]
[[Category: Metal-binding]]
[[Category: Mn-independent oxidation phenolic non-phenolic aromatic]]
[[Category: Mnii oxidation]]
[[Category: Oxidoreductase]]
[[Category: Peroxidase]]
[[Category: Polyvalent peroxidase]]
[[Category: Protoporphyrin ix]]
[[Category: Secreted]]
[[Category: Zymogen]]