2phd: Difference between revisions

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==Crystal Structure Determination of a Salicylate 1,2-Dioxygenase from Pseudaminobacter salicylatoxidans==
The line below this paragraph, containing "STRUCTURE_2phd", creates the "Structure Box" on the page.
<StructureSection load='2phd' size='340' side='right'caption='[[2phd]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2phd]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudaminobacter_salicylatoxidans Pseudaminobacter salicylatoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PHD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PHD FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
{{STRUCTURE_2phd| PDB=2phd |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2phd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2phd OCA], [https://pdbe.org/2phd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2phd RCSB], [https://www.ebi.ac.uk/pdbsum/2phd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2phd ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q67FT0_PSESE Q67FT0_PSESE]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ph/2phd_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2phd ConSurf].
<div style="clear:both"></div>


'''Crystal Structure Determination of a Salicylate 1,2-Dioxygenase from Pseudaminobacter salicylatoxidans'''
==See Also==
 
*[[Dioxygenase 3D structures|Dioxygenase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2PHD is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudaminobacter_salicylatoxidans Pseudaminobacter salicylatoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PHD OCA].
[[Category: Large Structures]]
[[Category: Gentisate 1,2-dioxygenase]]
[[Category: Pseudaminobacter salicylatoxidans]]
[[Category: Pseudaminobacter salicylatoxidans]]
[[Category: Single protein]]
[[Category: Briganti F]]
[[Category: Briganti, F.]]
[[Category: Ferraroni M]]
[[Category: Ferraroni, M.]]
[[Category: Matera I]]
[[Category: Matera, I.]]
[[Category: Beta-sandwich]]
[[Category: Oxidoreductase]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr 24 09:39:08 2008''
Retrieved from "https://proteopedia.org/2phd"