6pk6: Difference between revisions
From Proteopedia
Jump to navigationJump to search
No edit summary |
No edit summary |
||
| (2 intermediate revisions by the same user not shown) | |||
| Line 3: | Line 3: | ||
<StructureSection load='6pk6' size='340' side='right'caption='[[6pk6]], [[Resolution|resolution]] 2.10Å' scene=''> | <StructureSection load='6pk6' size='340' side='right'caption='[[6pk6]], [[Resolution|resolution]] 2.10Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[6pk6]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6PK6 OCA]. For a <b>guided tour on the structure components</b> use [ | <table><tr><td colspan='2'>[[6pk6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6PK6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6PK6 FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=OND:4-[5-[(2-aminophenyl)methylcarbamoyl]thiophen-2-yl]-1-benzothiophene-2-carboxamide'>OND</scene>, <scene name='pdbligand=PTR:O-PHOSPHOTYROSINE'>PTR</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6pk6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6pk6 OCA], [https://pdbe.org/6pk6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6pk6 RCSB], [https://www.ebi.ac.uk/pdbsum/6pk6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6pk6 ProSAT]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/PRP4K_HUMAN PRP4K_HUMAN] Serine/threonine kinase involved in spliceosomal assembly as well as mitosis and signaling regulation (PubMed:10799319, PubMed:12077342, PubMed:17513757, PubMed:17998396). Connects chromatin mediated regulation of transcription and pre-mRNA splicing (PubMed:12077342). During spliceosomal assembly, interacts with and phosphorylates PRPF6 and PRPF31, components of the U4/U6-U5 tri-small nuclear ribonucleoprotein (snRNP), to facilitate the formation of the spliceosome B complex. Plays a role in regulating transcription and the spindle assembly checkpoint (SAC) (PubMed:20118938). Associates with U5 snRNP and NCOR1 deacetylase complexes which may allow a coordination of pre-mRNA splicing with chromatin remodeling events involved in transcriptional regulation (PubMed:12077342). Associates and probably phosphorylates SMARCA4 and NCOR1 (PubMed:12077342). Phosphorylates SRSF1 (PubMed:11418604). Associates with kinetochores during mitosis and is necessary for recruitment and maintenance of the checkpoint proteins such as MAD1L1 and MAD12L1 at the kinetochores (PubMed:17998396). Phosphorylates and regulates the activity of the transcription factors such as ELK1 and KLF13 (PubMed:10799319, PubMed:17513757). Phosphorylates nuclear YAP1 and WWTR1/TAZ which induces nuclear exclusion and regulates Hippo signaling pathway, involved in tissue growth control (PubMed:29695716).<ref>PMID:10799319</ref> <ref>PMID:11418604</ref> <ref>PMID:12077342</ref> <ref>PMID:17513757</ref> <ref>PMID:17998396</ref> <ref>PMID:20118938</ref> <ref>PMID:29695716</ref> | ||
== References == | |||
<references/> | |||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Homo sapiens]] | |||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Arruda P]] | |||
[[Category: Arruda | [[Category: Azevedo H]] | ||
[[Category: Azevedo | [[Category: Counago RM]] | ||
[[Category: Counago | [[Category: Elkins JM]] | ||
[[Category: Elkins | [[Category: Fala AM]] | ||
[[Category: Fala | [[Category: Godoi PHC]] | ||
[[Category: Godoi | [[Category: Guimaraes CRW]] | ||
[[Category: Guimaraes | [[Category: Mascarello A]] | ||
[[Category: Mascarello | [[Category: Ramos PZ]] | ||
[[Category: Ramos | [[Category: Santiago AS]] | ||
[[Category: Segretti N]] | |||
[[Category: Santiago | [[Category: Sriranganadane D]] | ||
[[Category: Segretti | |||
[[Category: Sriranganadane | |||