Nitrogenase 3D structures: Difference between revisions

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{{#tree:id=OrganizedByTopic|openlevels=0|
{{#tree:id=OrganizedByTopic|openlevels=0|


*Nase Mo-Fe
*Nase Mo-Fe protein


**[[3pdi]] – AvNase α+β subunit [Fe4S4 Fe8S9] – ''Azotobacter vinelandii''<br />
**[[1m1n]], [[2min]], [[3k1a]], [[3min]], [[3u7q]] – AvNase + subunit [CFe7MoS9 Fe8S7] - ''Azotobacter vinelandii''<br />
**[[2kic]] – AvNase γ subunit – NMR<br />
**[[7jrf]] - AvNase + subunit [CFe7MoS9 Fe8S7] + CO<br />
**[[3k1a]], [[1m1n]], [[2min]], [[3min]], [[3u7q]] – AvNase α+β subunit [CFe7MoS9 Fe8S7]<br />
**[[4xpi]], [[5cx1]], [[7mci]] - AvNase + (mutant) subunit [CFe7MoS9 Fe8S7]<br />
**[[4xpi]], [[5cx1]] - AvNase + (mutant) subunit [CFe7MoS9 Fe8S7]<br />
**[[4tku]], [[5bvg]] - AvNase + subunit [CFe7MoS9 Fe8S7 Fe2]<br />
**[[4tku]], [[5bvg]] - AvNase α+β subunit [CFe7MoS9 Fe8S7 Fe2]<br />
**[[8bts]], [[8e3v]] - AvNase + (mutant) subunit [CFe7MoS9 Fe8S7 Fe2]<br />
**[[6o7o]], [[6o7m]], [[6o7l]], [[6o7p]], [[6o7q]], [[6o7r]] - AvNase + (mutant) subunit [CFe7MoS9 Fe8S7 Fe2]<br />
**[[8dby]], [[8dpn]] - AvNase + subunit [CFe7MoS9 Fe8S7 Fe2] - Cryo EM<br />
**[[8e3u]] - AvNase + subunit [CFe7MoS9 Fe7S7 Fe2]<br />
**[[8e3t]] - AvNase + (mutant) subunit [CFe7MoS9 Fe7S7 Fe2]<br />
**[[6o7o]], [[6o7m]], [[6o7l]], [[6o7p]], [[6o7q]], [[6o7r]], [[7ut6]] - AvNase + (mutant) subunit [CFe7MoS9 Fe8S7 Fe2]<br />
**[[6o7s]] - AvNase + (mutant) subunit [CFe7MoS9 Fe6S7 Fe2]<br />
**[[6o7s]] - AvNase + (mutant) subunit [CFe7MoS9 Fe6S7 Fe2]<br />
**[[6op4]] - AvNase + subunit [CFe7MoS9 Fe8S7 Mg] <br />
**[[6op4]] - AvNase + subunit [CFe7MoS9 Fe8S7 Mg] <br />
**[[4tkv]], [[5bvh]]- AvNase α+β subunit [CFe7MoS9 Fe8S7 Fe2] + CO <br />
**[[4tkv]], [[5bvh]] - AvNase + subunit [CFe7MoS9 Fe8S7 Fe2] + CO <br />
**[[6op1]] - AvNase + subunit [CFe7MoS9 Fe8S7 Mg] + CO <br />
**[[7ut7]], [[8crs]], [[8dbx]], [[8enl]], [[8enm]], [[8enn]] - AvNase + subunit [CFe7MoS9 Fe8S7 Fe2] – Cryo EM<br />
**[[6op2]], [[6op3]] - AvNase + subunit [CFe7MoS9 Fe8S7 Se] + <br />
**[[6op1]], [[7jrf]] - AvNase + subunit [CFe7MoS9 Fe8S7 Mg] + CO <br />
**[[4wza]] - AvNase α+β subunit [CFe7MoS9 Fe8S7 Fe4S4 Fe2] + ADP + ACP<br />
**[[6op2]], [[6op3]] - AvNase + subunit [CFe7MoS9 Fe8S7 Se Mg] <br />
**[[4wzb]] - AvNase α+β subunit [CFe7MoS9 Fe8S7 Fe4S4 Fe2] + ACP<br />
**[[4nd8]], [[6bbl]], [[6cdk]], [[6vxt]] - AvNase + subunit [CFe7MoS9 Fe8S7 Fe+3]<br />
**[[4nd8]], [[6bbl]], [[6cdk]] - AvNase α+β subunit [CFe7MoS9 Fe8S7 Fe+3]<br />
**[[9hb9]], [[9hbc]], [[9hbn]] - AvNase +subunit [CFe7MoS9 Fe8S7]<br />
**[[1l5h]] - AvNase α+β subunit [Fe8S7]<br />
**[[8p8g]] - AvNase + (mutant) subunit [CFe7MoS9 Fe8S7]<br />
**[[1h1l]], [[1qgu]], [[1qh8]] - KpNase α+β subunit [Fe7MoS9 Fe8S7] – ''Klebsiella pneumoniae''<br />
**[[8tc3]], [[9cjb]], [[9cjc]], [[9cjd]], [[9cje]], [[9cqx]], [[9cqy]], [[9cqz]], [[9cr0]], [[9ctz]], [[9mly]], [[9mlz]], [[9mm0]], [[9mm1]], [[9nsv]] - AvNase +subunit [CFe7MoS9 Fe8S7 Fe+3] – Cryo EM<br />
**[[1qh1]] - KpNase α+β subunit + iron protein 1 [Fe7MoS9 Fe8S7]<br />
**[[8eno]], [[9cjf]] - AvNase +subunit [CFe7MoS9 Fe8S7 Fe+3] + Nase associated factor T – Cryo EM<br />
**[[1fp4]] - AvNase α+β subunit (mutant) [Fe7MoS9 Fe8S8]<br />
**[[6o7n]] - AvNase + subunit (mutant) [CFe7MoS9 Fe8S7 Fe+3]<br />
**[[1mio]] - CpNase α+β subunit (mutant) [Fe7MoS9 Fe8S8] - ''Clostridium pasteurianum''<br />
**[[6ug0]] - AvNase + subunit (mutant) [CFe7MoS9 Fe8S7 Fe+3] + N2<br />
**[[4wes]], [[4wn9]], [[4wna]], [[5vpw]], [[5vq3]], [[5vq4]] - CpNase α+β subunit [CFe7MoS9 Fe8S7 Fe2]<br />
**[[1fp4]] - AvNase + subunit (mutant) [Fe7MoS9 Fe8S8] <br />
**[[2afh]], [[1m1y]], [[1g20]] - AvNase α+β subunit + iron protein 1 [Fe4S4 Fe7MoS9 Fe8S7]<br />
**[[1l5h]] - AvNase + subunit [Fe8S7] <br />
**[[2afi]], [[4wzb]], [[1m34]], [[1g21]] - AvNase α+β subunit + iron protein 1 [Fe4S4 Fe7MoS9 Fe8S7] + nucleotide<br />
**[[1h1l]], [[1qgu]], [[1qh8]] - KpNase + subunit [Fe7MoS9 Fe8S7] – ''Klebsiella pneumoniae''<br />
**[[1n2c]] - AvNase α+β subunit + iron protein 1 [Fe4S4 Fe7MoS9 Fe8S7] + AlF4<br />
**[[1qh1]] - KpNase + subunit [Fe7MoS9 Fe8S7] <br />
**[[5koh]], [[5koj]] – AvNase + subunit iron protein 1 [FeS] [CFe7MoS9 Fe8S7 Fe2] – ''Gluconacetobacter diazotrophicus'' <br />
**[[1mio]] - CpNase + subunit (mutant) [Fe7MoS9 Fe8S8] - ''Clostridium pasteurianum''<br />
**[[4wes]], [[4wn9]], [[4wna]], [[5vpw]], [[5vq3]], [[5vq4]] - CpNase + subunit [CFe7MoS9 Fe8S7 Fe2]<br />


*Nase iron protein


**[[2c8v]] – AvNase iron protein 1 [FeS]<br />
*Nase iron protein 1
**[[1g1m]], [[1g5p]], [[2nip]], [[6o0b]], [[6n4k]], [[6n4j]] - AvNase iron protein 1 [Fe4S4]<br />
 
**[[1fp6]], [[1nip]], [[6n4m]], [[6n4l]] - AvNase iron protein 1 [Fe4S4] + ADP<br />
**[[2c8v]], [[5koh]], [[5koj]] – AvNase + subunit iron protein 1 [FeS]<br />
**[[1xcp]], [[1xd8]], [[1xdb]], [[1rw4]], [[1de0]] - AvNase iron protein 1 (mutant) [Fe4S4]<br />
**[[1g1m]], [[1g5p]], [[2nip]], [[6n4j]], [[6n4k]], [[6o0b]], [[7tpy]], [[9haz]] - AvNase iron protein 1 [Fe4S4] <br />
**[[1de0]], [[1xcp]], [[1xd8]], [[1xdb]], [[1rw4]] - AvNase iron protein 1 (mutant) [Fe4S4] <br />
**[[1fp6]], [[1nip]], [[6n4m]], [[6n4l]], [[7tpv]],[[7tpw]],  [[7tpx]], [[7tpz]], [[7tqj]] - AvNase iron protein 1 [Fe4S4] + ADP<br />
**[[7t4h]],[[7tne]], [[7tpn]], [[7tpo]], [[7tq0]], [[7tq9]], [[7tqe]], [[7tqf]], [[7tqh]], [[7tqi]], [[7tqk]], [[7tpn]] - AvNase + subunit  [Fe4S4 Fe4Se4] + ADP<br />
**[[8boq]] - AvNase + subunit  [Fe8S9 Fe8S7] + O<br />
**[[6q93]] - AvNase iron protein 1 [Fe4S4] + MgADP<br />
**[[6q93]] - AvNase iron protein 1 [Fe4S4] + MgADP<br />
**[[7qqa]] - AvNase iron protein 1 (mutant) [Fe4S4] + MgADP<br />
**[[1xd9]] - AvNase iron protein 1 (mutant) [Fe4S4] + MgADP<br />
**[[1xd9]] - AvNase iron protein 1 (mutant) [Fe4S4] + MgADP<br />
**[[1cp2]] - CpNase iron protein 1 [Fe4S4] <br />
**[[1cp2]] - CpNase iron protein 1 [Fe4S4] <br />
**[[6nzj]] - Nase iron protein 1 [Fe4S4] – ''Methanosarcina acetivorans''<br />
**[[6nzj]] - Nase iron protein 1 [Fe4S4] – ''Methanosarcina acetivorans''<br />
**[[7jmb]] - MtNase [Fe4S4] <br />
**[[7bi7]] - MtNase [Fe4S4 Fe8S7] <br />
**[[8pbb]] - RcNase alpha chain + Nase iron-iron protein beta subunit [Fe8S7] – ''Rhodobacter capsulatus'' - Cryo EM<br />
**[[8q5w]] - Nase iron protein 1 [Fe4S4] + MgADP + NO3 – ''Methanocaldococcus infernus''<br />
**[[8q5x]] - Nase iron protein 1 [Fe4S4] + MgADP – ''Methanococcus maripaludis''<br />
**[[8q50]], [[8q5t]], [[8q5v]] - Nase iron protein 1 [Fe4S4] – ''Methanomethanococcus thermolithotrophicus''<br />
*Nase Mo-Fe protein complex with Nase iron protein 1
**[[8rhp]], [[9cu0]], [[9cu1]], [[9cu2]] - AvNase + subunit [CFe7MoS9 Fe8S7 Fe2] + iron protein 1 [Fe4S4] + FeSII – Cryo EM<br />
**[[7uta]], [[8dfc]], [[8dfd]] - AvNase + subunit [CFe7MoS9 Fe8S7 Fe2] + iron protein 1 [Fe4S4] + ADP<br />
**[[7ut8]], [[7ut9]] - AvNase + subunit [CFe7MoS9 Fe8S7 Fe2] + iron protein 1 [Fe4S4] + ATP – Cryo EM<br />
**[[4wza]] - AvNase + subunit [CFe7MoS9 Fe8S7 Fe2] + iron protein 1 [Fe4S4] + ADP + ACP<br />
**[[4wzb]] - AvNase + subunit [CFe7MoS9 Fe8S7 Fe2] + iron protein 1 [Fe4S4] + ACP<br />
**[[1g20]], [[1m1y]], [[2afh]] - AvNase + subunit Fe7MoS9 Fe8S7]] + iron protein 1 [Fe4S4]<br />
**[[1g21]]. [[1m34]], [[2afi]], [[4wzb]] - AvNase + subunit [Fe7MoS9 Fe8S7] + iron protein 1 [Fe4S4] + nucleotide<br />
**[[1n2c]] - AvNase + subunit [Fe7MoS9 Fe8S7] + iron protein 1 [Fe4S4] + AlF4<br />
**[[8oie]] - RcNase alpha chain + Nase iron-iron protein beta subunit + Nase iron-iron protein delta subunit + iron protein 1 + ADP [Fe8S9 Fe8S7 Fe4S4] – Cryo EM<br />
**[[2afh]], [[1m1y]], [[1g20]] - AvNase + subunit Fe7MoS9 Fe8S7]] + iron protein 1 [Fe4S4]<br />
**[[2afi]], [[4wzb]], [[1m34]]. [[1g21]] - AvNase + subunit [Fe7MoS9 Fe8S7] + iron protein 1 [Fe4S4] + nucleotide<br />
**[[1n2c]] - AvNase + subunit [Fe7MoS9 Fe8S7] + iron protein 1 [Fe4S4] + AlF4<br />


*Nase V-Fe protein
* Nase V-Fe protein


**[[5n6y]], [[6fea]] – AvNase  α+β+δ subunit [Fe7S8V + Fe8S7] + CO3<br />
**[[5n6y]], [[6fea]] – AvNase  ++d subunit [C-Fe7-N-S7-V  + Fe8-S7] + CO3<br />
**[[7adr]], [[7aiz]] – AvNase  ++d subunit [C-Fe7-N-S7-V  + Fe8-S7] + CO3 + CO<br />
**[[7ady]] – AvNase  ++d subunit [C-Fe7-N-S7-V ] <br />
**[[2kic]] – AvNase  subunit – NMR<br />
**[[7jma]] - MtNase – ''Methanothermobacter thermautotropicus''<br />


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[[Category:Topic Page]]
[[Category:Topic Page]]

Latest revision as of 09:06, 23 March 2026

3D structure of Nitrogenase

Updated on 23-March-2026

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel

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