5yc3: Difference between revisions

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<StructureSection load='5yc3' size='340' side='right'caption='[[5yc3]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
<StructureSection load='5yc3' size='340' side='right'caption='[[5yc3]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5yc3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YC3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5YC3 FirstGlance]. <br>
<table><tr><td colspan='2'>[[5yc3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YC3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5YC3 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.601&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AL3, At3g42790, T21C14_10 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5yc3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yc3 OCA], [https://pdbe.org/5yc3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5yc3 RCSB], [https://www.ebi.ac.uk/pdbsum/5yc3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5yc3 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5yc3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yc3 OCA], [http://pdbe.org/5yc3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5yc3 RCSB], [http://www.ebi.ac.uk/pdbsum/5yc3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5yc3 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/ALFL3_ARATH ALFL3_ARATH]] Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes.  
[https://www.uniprot.org/uniprot/ALFL3_ARATH ALFL3_ARATH] Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Arath]]
[[Category: Arabidopsis thaliana]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Li, H]]
[[Category: Li H]]
[[Category: Zhang, B]]
[[Category: Zhang B]]
[[Category: Zhao, S]]
[[Category: Zhao S]]
[[Category: Phd finger]]
[[Category: Transcription]]

Latest revision as of 08:26, 22 November 2023

Crystal structure of AL3 PHD finger bound to H3K4me2

5yc3, resolution 2.60Å

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