4oxd: Difference between revisions

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<StructureSection load='4oxd' size='340' side='right'caption='[[4oxd]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
<StructureSection load='4oxd' size='340' side='right'caption='[[4oxd]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4oxd]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_acidophilus Lactobacillus acidophilus] and [http://en.wikipedia.org/wiki/Strr6 Strr6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OXD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4OXD FirstGlance]. <br>
<table><tr><td colspan='2'>[[4oxd]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactobacillus_acidophilus Lactobacillus acidophilus] and [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_R6 Streptococcus pneumoniae R6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OXD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4OXD FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=LYS:LYSINE'>LYS</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=DSG:D-ASPARAGINE'>DSG</scene>, <scene name='pdbligand=MUB:N-ACETYLMURAMIC+ACID'>MUB</scene>, <scene name='pdbligand=ZGL:D-ALPHA-GLUTAMINE'>ZGL</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=DSG:D-ASPARAGINE'>DSG</scene>, <scene name='pdbligand=LYS:LYSINE'>LYS</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MUB:N-ACETYLMURAMIC+ACID'>MUB</scene>, <scene name='pdbligand=ZGL:D-ALPHA-GLUTAMINE'>ZGL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ox5|4ox5]], [[4ox3|4ox3]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4oxd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4oxd OCA], [https://pdbe.org/4oxd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4oxd RCSB], [https://www.ebi.ac.uk/pdbsum/4oxd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4oxd ProSAT]</span></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">spr0554 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=171101 STRR6])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4oxd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4oxd OCA], [http://pdbe.org/4oxd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4oxd RCSB], [http://www.ebi.ac.uk/pdbsum/4oxd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4oxd ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q8DQQ1_STRR6 Q8DQQ1_STRR6]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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[[Category: Lactobacillus acidophilus]]
[[Category: Lactobacillus acidophilus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Strr6]]
[[Category: Streptococcus pneumoniae R6]]
[[Category: Aldridge, C]]
[[Category: Aldridge C]]
[[Category: Cleverley, R M]]
[[Category: Cleverley RM]]
[[Category: Daniel, R A]]
[[Category: Daniel RA]]
[[Category: Duchene, M C]]
[[Category: Duchene MC]]
[[Category: Hoyland, C N]]
[[Category: Hoyland CN]]
[[Category: Lewis, R J]]
[[Category: Lewis RJ]]
[[Category: Sidiq, K]]
[[Category: Sidiq K]]
[[Category: Vollmer, W]]
[[Category: Vollmer W]]
[[Category: Cell wall modifying enzyme]]
[[Category: Hydrolase]]
[[Category: Las family]]
[[Category: Ld-carboxypeptidase]]
Retrieved from "https://proteopedia.org/4oxd"