5xzb: Difference between revisions

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<StructureSection load='5xzb' size='340' side='right'caption='[[5xzb]], [[Resolution|resolution]] 2.13&Aring;' scene=''>
<StructureSection load='5xzb' size='340' side='right'caption='[[5xzb]], [[Resolution|resolution]] 2.13&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5xzb]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XZB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5XZB FirstGlance]. <br>
<table><tr><td colspan='2'>[[5xzb]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XZB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5XZB FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=A9Y:(3R)-3-[1-(1H-benzimidazol-2-yl)-5-hydroxy-3-methyl-1H-pyrazol-4-yl]-2-benzofuran-1(3H)-one'>A9Y</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.13&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Mb21d1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A9Y:(3R)-3-[1-(1H-benzimidazol-2-yl)-5-hydroxy-3-methyl-1H-pyrazol-4-yl]-2-benzofuran-1(3H)-one'>A9Y</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cyclic_GMP-AMP_synthase Cyclic GMP-AMP synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.86 2.7.7.86] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5xzb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xzb OCA], [https://pdbe.org/5xzb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5xzb RCSB], [https://www.ebi.ac.uk/pdbsum/5xzb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5xzb ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5xzb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xzb OCA], [http://pdbe.org/5xzb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5xzb RCSB], [http://www.ebi.ac.uk/pdbsum/5xzb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5xzb ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/CGAS_MOUSE CGAS_MOUSE]] Nucleotidyltransferase that catalyzes formation of cyclic GMP-AMP (cGAMP) from ATP and GTP and exhibits antiviral activity. Has antiviral activity by acting as a key cytosolic DNA sensor, the presence of DNA in the cytoplasm being a danger signal that triggers the immune responses. Binds cytosolic DNA directly, leading to activation and synthesis of cGAMP, a second messenger that binds to and activates TMEM173/STING, thereby triggering type-I interferon production.  
[https://www.uniprot.org/uniprot/CGAS_MOUSE CGAS_MOUSE] Nucleotidyltransferase that catalyzes formation of cyclic GMP-AMP (cGAMP) from ATP and GTP and exhibits antiviral activity. Has antiviral activity by acting as a key cytosolic DNA sensor, the presence of DNA in the cytoplasm being a danger signal that triggers the immune responses. Binds cytosolic DNA directly, leading to activation and synthesis of cGAMP, a second messenger that binds to and activates TMEM173/STING, thereby triggering type-I interferon production.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Cyclic GMP-AMP synthase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Lk3 transgenic mice]]
[[Category: Mus musculus]]
[[Category: Adura, C]]
[[Category: Adura C]]
[[Category: Aida, J]]
[[Category: Aida J]]
[[Category: Asano, Y]]
[[Category: Asano Y]]
[[Category: Ascano, M]]
[[Category: Ascano M]]
[[Category: Aso, K]]
[[Category: Aso K]]
[[Category: Gao, P]]
[[Category: Gao P]]
[[Category: Glickman, J F]]
[[Category: Glickman JF]]
[[Category: Gogakos, T]]
[[Category: Gogakos T]]
[[Category: Imaeda, T]]
[[Category: Imaeda T]]
[[Category: Lama, L]]
[[Category: Lama L]]
[[Category: Luz, A]]
[[Category: Luz A]]
[[Category: Okamoto, R]]
[[Category: Okamoto R]]
[[Category: Patel, D J]]
[[Category: Patel DJ]]
[[Category: Reasoner, S]]
[[Category: Reasoner S]]
[[Category: Rothamel, K]]
[[Category: Rothamel K]]
[[Category: Steinberg, J]]
[[Category: Steinberg J]]
[[Category: Tuschl, T]]
[[Category: Tuschl T]]
[[Category: Vincent, J]]
[[Category: Vincent J]]
[[Category: Cga]]
[[Category: Immune system-inhibitor complex]]
[[Category: Inhibitor]]
[[Category: Sting]]

Latest revision as of 10:06, 22 May 2024

Mouse cGAS bound to the inhibitor RU365

5xzb, resolution 2.13Å

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