2bhi: Difference between revisions

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<StructureSection load='2bhi' size='340' side='right'caption='[[2bhi]], [[Resolution|resolution]] 2.31&Aring;' scene=''>
<StructureSection load='2bhi' size='340' side='right'caption='[[2bhi]], [[Resolution|resolution]] 2.31&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2bhi]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Naja_atra Naja atra]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BHI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BHI FirstGlance]. <br>
<table><tr><td colspan='2'>[[2bhi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Naja_atra Naja atra]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BHI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BHI FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=C10:HEXAETHYLENE+GLYCOL+MONODECYL+ETHER'>C10</scene>, <scene name='pdbligand=SFT:SULFOGALACTOCERAMIDE'>SFT</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.31&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1h0j|1h0j]], [[1i02|1i02]], [[1xt3|1xt3]], [[2crs|2crs]], [[2crt|2crt]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C10:HEXAETHYLENE+GLYCOL+MONODECYL+ETHER'>C10</scene>, <scene name='pdbligand=SFT:SULFOGALACTOCERAMIDE'>SFT</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bhi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bhi OCA], [http://pdbe.org/2bhi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bhi RCSB], [http://www.ebi.ac.uk/pdbsum/2bhi PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2bhi ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bhi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bhi OCA], [https://pdbe.org/2bhi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bhi RCSB], [https://www.ebi.ac.uk/pdbsum/2bhi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bhi ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/3SA3_NAJAT 3SA3_NAJAT] Basic protein that binds to cell membrane and depolarizes cardiomyocytes. This cytotoxin also possesses lytic activity on many other cells, including red blood cells (PubMed:8182052). Interaction with sulfatides in the cell membrane induces pore formation and cell internalization. Cytotoxicity is due to pore formation, and to another mechanism independent of membrane-damaging activity. When internalized, it targets the mitochondrial membrane and induces mitochondrial swelling and fragmentation. It inhibits protein kinases C. It binds to the integrin alpha-V/beta-3 (ITGAV/ITGB3) with a moderate affinity (PubMed:16407244). It also binds with high affinity to heparin (PubMed:17685633).<ref>PMID:15922335</ref> <ref>PMID:16263708</ref> <ref>PMID:16407244</ref> <ref>PMID:17714752</ref> <ref>PMID:8182052</ref> <ref>PMID:8448165</ref> <ref>PMID:9245415</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Naja atra]]
[[Category: Naja atra]]
[[Category: Hsiao, C D]]
[[Category: Hsiao C-D]]
[[Category: Lee, S C]]
[[Category: Lee S-C]]
[[Category: Liu, J H]]
[[Category: Liu J-H]]
[[Category: Wang, C H]]
[[Category: Wang C-H]]
[[Category: Wu, P L]]
[[Category: Wu P-L]]
[[Category: Wu, W G]]
[[Category: Wu W-G]]
[[Category: Cardiotoxin]]
[[Category: Cobra cardiotoxin]]
[[Category: Cytolysis]]
[[Category: Glycosphingolipid]]
[[Category: Membrane pore formation]]
[[Category: Sulfogalactoceramide sulfatide]]

Latest revision as of 13:37, 13 December 2023

Crystal structure of Taiwan cobra cardiotoxin A3 complexed with sulfogalactoceramide

2bhi, resolution 2.31Å

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