2dds: Difference between revisions
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<StructureSection load='2dds' size='340' side='right'caption='[[2dds]], [[Resolution|resolution]] 1.80Å' scene=''> | <StructureSection load='2dds' size='340' side='right'caption='[[2dds]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2dds]] is a 4 chain structure with sequence from [ | <table><tr><td colspan='2'>[[2dds]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DDS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DDS FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dds FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dds OCA], [https://pdbe.org/2dds PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dds RCSB], [https://www.ebi.ac.uk/pdbsum/2dds PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dds ProSAT], [https://www.topsan.org/Proteins/RSGI/2dds TOPSAN]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/PHL2_BACCE PHL2_BACCE] Required, with sphingomyelinase, to effect target cell lysis (hemolysis). | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dd/2dds_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dd/2dds_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| Line 37: | Line 36: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Bacillus cereus]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Ago H]] | |||
[[Category: Ago | [[Category: Katunuma N]] | ||
[[Category: Katunuma | [[Category: Miyano M]] | ||
[[Category: Miyano | [[Category: Ochi S]] | ||
[[Category: Ochi | [[Category: Oda M]] | ||
[[Category: Oda | [[Category: Sakurai J]] | ||
[[Category: Takahashi M]] | |||
[[Category: Sakurai | [[Category: Tsuge H]] | ||
[[Category: Takahashi | |||
[[Category: Tsuge | |||
