6v1k: Difference between revisions

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<StructureSection load='6v1k' size='340' side='right'caption='[[6v1k]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
<StructureSection load='6v1k' size='340' side='right'caption='[[6v1k]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6v1k]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6V1K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6V1K FirstGlance]. <br>
<table><tr><td colspan='2'>[[6v1k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6V1K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6V1K FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=5SW:4-[4-[(DIMETHYLAMINO)METHYL]-3,5-DIMETHOXY-PHENYL]-2-METHYL-2,7-NAPHTHYRIDIN-1-ONE'>5SW</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6v1k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6v1k OCA], [http://pdbe.org/6v1k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6v1k RCSB], [http://www.ebi.ac.uk/pdbsum/6v1k PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6v1k ProSAT]</span></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5SW:4-[4-[(DIMETHYLAMINO)METHYL]-3,5-DIMETHOXY-PHENYL]-2-METHYL-2,7-NAPHTHYRIDIN-1-ONE'>5SW</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6v1k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6v1k OCA], [https://pdbe.org/6v1k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6v1k RCSB], [https://www.ebi.ac.uk/pdbsum/6v1k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6v1k ProSAT]</span></td></tr>
</table>
</table>
== Disease ==
== Disease ==
[[http://www.uniprot.org/uniprot/BRD4_HUMAN BRD4_HUMAN]] Note=A chromosomal aberration involving BRD4 is found in a rare, aggressive, and lethal carcinoma arising in midline organs of young people. Translocation t(15;19)(q14;p13) with NUT which produces a BRD4-NUT fusion protein.<ref>PMID:12543779</ref> <ref>PMID:11733348</ref>
[https://www.uniprot.org/uniprot/BRD4_HUMAN BRD4_HUMAN] Note=A chromosomal aberration involving BRD4 is found in a rare, aggressive, and lethal carcinoma arising in midline organs of young people. Translocation t(15;19)(q14;p13) with NUT which produces a BRD4-NUT fusion protein.<ref>PMID:12543779</ref> <ref>PMID:11733348</ref>  
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/BRD4_HUMAN BRD4_HUMAN]] Plays a role in a process governing chromosomal dynamics during mitosis (By similarity).  
[https://www.uniprot.org/uniprot/BRD4_HUMAN BRD4_HUMAN] Plays a role in a process governing chromosomal dynamics during mitosis (By similarity).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 6v1k" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6v1k" style="background-color:#fffaf0;"></div>
==See Also==
*[[Bromodomain-containing protein 3D structures|Bromodomain-containing protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Chan, A]]
[[Category: Chan A]]
[[Category: Karim, M R]]
[[Category: Karim MR]]
[[Category: Schonbrunn, E]]
[[Category: Schonbrunn E]]
[[Category: Bet]]
[[Category: Brd]]
[[Category: Brd4]]
[[Category: Bromosporine]]
[[Category: Gene regulation]]
[[Category: Hunk1]]

Latest revision as of 08:02, 11 October 2023

Crystal structure of the first bromodomain (BD1) of human BRD4 bound to BI7273

6v1k, resolution 1.75Å

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