7bsj: Difference between revisions

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New page: '''Unreleased structure''' The entry 7bsj is ON HOLD Authors: Chen, W.L., Tai, S.C., Hung, H.C., Ho, M.C. Description: Crystal structure of human ME2 R484W [[Category: Unreleased Struc...
 
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'''Unreleased structure'''


The entry 7bsj is ON HOLD
==Crystal structure of human ME2 R484W==
<StructureSection load='7bsj' size='340' side='right'caption='[[7bsj]], [[Resolution|resolution]] 2.48&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[7bsj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BSJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7BSJ FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.48&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FUM:FUMARIC+ACID'>FUM</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=TTN:TARTRONATE'>TTN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7bsj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bsj OCA], [https://pdbe.org/7bsj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7bsj RCSB], [https://www.ebi.ac.uk/pdbsum/7bsj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7bsj ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/MAOM_HUMAN MAOM_HUMAN]
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Human mitochondrial NAD(P)(+)-dependent malic enzyme (ME2) is well recognized to associate with cancer cell metabolism, and the single nucleotide variants (SNVs) of ME2 may play a role in enzyme regulation. Here we reported that the SNVs of ME2 occurring in the allosteric sites lead to inactivation or overactivation of ME2. Two ME2-SNVs, ME2_R67Q and ME2-R484W, that demonstrated inactivating or overactivating enzyme activities of ME2, respectively, have different impact toward the cells. The cells with overactivating SNV enzyme, ME2_R484W, grow more rapidly and are more resistant to cellular senescence than the cells with wild-type or inactivating SNV enzyme, ME2_R67Q. Crystal structures of these two ME2-SNVs reveal that ME2_R67Q was an inactivating "dead form," and ME2_R484W was an overactivating "closed form" of the enzyme. The resolved ME2-SNV structures provide a molecular basis to explain the abnormal kinetic properties of these SNV enzymes.


Authors: Chen, W.L., Tai, S.C., Hung, H.C., Ho, M.C.
Single nucleotide variants lead to dysregulation of the human mitochondrial NAD(P)(+)-dependent malic enzyme.,Hsieh JY, Yang HP, Tewary SK, Cheng HC, Liu YL, Tai SC, Chen WL, Hsu CH, Huang TJ, Chou CJ, Huang YN, Peng CT, Ho MC, Liu GY, Hung HC iScience. 2021 Jan 13;24(2):102034. doi: 10.1016/j.isci.2021.102034. eCollection , 2021 Feb 19. PMID:33554057<ref>PMID:33554057</ref>


Description: Crystal structure of human ME2 R484W
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
[[Category: Hung, H.C]]
<div class="pdbe-citations 7bsj" style="background-color:#fffaf0;"></div>
[[Category: Chen, W.L]]
 
[[Category: Tai, S.C]]
==See Also==
[[Category: Ho, M.C]]
*[[Malate Dehydrogenase 3D structures|Malate Dehydrogenase 3D structures]]
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Chen WL]]
[[Category: Ho MC]]
[[Category: Hung HC]]
[[Category: Tai SC]]

Latest revision as of 10:54, 15 November 2023

Crystal structure of human ME2 R484W

7bsj, resolution 2.48Å

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