5eqv: Difference between revisions
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<StructureSection load='5eqv' size='340' side='right'caption='[[5eqv]], [[Resolution|resolution]] 1.45Å' scene=''> | <StructureSection load='5eqv' size='340' side='right'caption='[[5eqv]], [[Resolution|resolution]] 1.45Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[5eqv]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[5eqv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis_CO92 Yersinia pestis CO92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EQV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5EQV FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MLT:D-MALATE'>MLT</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.45Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MLT:D-MALATE'>MLT</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5eqv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5eqv OCA], [https://pdbe.org/5eqv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5eqv RCSB], [https://www.ebi.ac.uk/pdbsum/5eqv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5eqv ProSAT]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/A0A5P8YBY3_YERPE A0A5P8YBY3_YERPE] This bifunctional enzyme catalyzes two consecutive reactions during ribonucleic acid degradation. Converts a 2',3'-cyclic nucleotide to a 3'-nucleotide and then the 3'-nucleotide to the corresponding nucleoside and phosphate.[ARBA:ARBA00056111] | |||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Yersinia pestis | [[Category: Yersinia pestis CO92]] | ||
[[Category: Anderson | [[Category: Anderson WF]] | ||
[[Category: Brunzelle | [[Category: Brunzelle JS]] | ||
[[Category: Dubrovska I]] | |||
[[Category: Dubrovska | [[Category: Grimshaw S]] | ||
[[Category: Grimshaw | [[Category: Kiryukhina O]] | ||
[[Category: Kiryukhina | [[Category: Kwon K]] | ||
[[Category: Kwon | [[Category: Minasov G]] | ||
[[Category: Minasov | [[Category: Shuvalova L]] | ||
[[Category: Shuvalova | |||
Latest revision as of 08:16, 4 March 2026
1.45 Angstrom Crystal Structure of Bifunctional 2',3'-cyclic Nucleotide 2'-phosphodiesterase/3'-Nucleotidase Periplasmic Precursor Protein from Yersinia pestis with Phosphate bound to the Active site
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