1b71: Difference between revisions

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[[Image:1b71.gif|left|200px]]


<!--
==RUBRERYTHRIN==
The line below this paragraph, containing "STRUCTURE_1b71", creates the "Structure Box" on the page.
<StructureSection load='1b71' size='340' side='right'caption='[[1b71]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1b71]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._Hildenborough Desulfovibrio vulgaris str. Hildenborough]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1B71 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1B71 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_1b71|  PDB=1b71 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1b71 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1b71 OCA], [https://pdbe.org/1b71 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1b71 RCSB], [https://www.ebi.ac.uk/pdbsum/1b71 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1b71 ProSAT]</span></td></tr>
 
</table>
'''RUBRERYTHRIN'''
== Function ==
 
[https://www.uniprot.org/uniprot/RUBY_DESVH RUBY_DESVH] May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide (By similarity).
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
1B71 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1B71 OCA].  
Check<jmol>
 
  <jmolCheckbox>
==Reference==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b7/1b71_consurf.spt"</scriptWhenChecked>
Alternative metal-binding sites in rubrerythrin., Sieker LC, Holmes M, Le Trong I, Turley S, Santarsiero BD, Liu MY, LeGall J, Stenkamp RE, Nat Struct Biol. 1999 Apr;6(4):308-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10201393 10201393]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Desulfovibrio vulgaris]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Single protein]]
  </jmolCheckbox>
[[Category: Holmes, M.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1b71 ConSurf].
[[Category: Legall, J.]]
<div style="clear:both"></div>
[[Category: Liu, M Y.]]
__TOC__
[[Category: Santarsiero, B D.]]
</StructureSection>
[[Category: Sieker, L C.]]
[[Category: Desulfovibrio vulgaris str. Hildenborough]]
[[Category: Stenkap, R E.]]
[[Category: Large Structures]]
[[Category: Trong, I Le.]]
[[Category: Holmes M]]
[[Category: Turley, S.]]
[[Category: Le Trong I]]
[[Category: Electron transport]]
[[Category: Legall J]]
[[Category: Ferroxidase]]
[[Category: Liu M-Y]]
[[Category: Iron]]
[[Category: Santarsiero BD]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May  2 11:09:07 2008''
[[Category: Sieker LC]]
[[Category: Stenkamp RE]]
[[Category: Turley S]]

Latest revision as of 05:37, 9 August 2023

RUBRERYTHRIN

1b71, resolution 1.90Å

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