6xig: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(One intermediate revision by the same user not shown)
Line 3: Line 3:
<StructureSection load='6xig' size='340' side='right'caption='[[6xig]], [[Resolution|resolution]] 1.59&Aring;' scene=''>
<StructureSection load='6xig' size='340' side='right'caption='[[6xig]], [[Resolution|resolution]] 1.59&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6xig]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pedhd Pedhd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6XIG OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6XIG FirstGlance]. <br>
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6XIG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6XIG FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=TAR:D(-)-TARTARIC+ACID'>TAR</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.59&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mqnE, Phep_1880 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=485917 PEDHD])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=TAR:D(-)-TARTARIC+ACID'>TAR</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Aminodeoxyfutalosine_synthase Aminodeoxyfutalosine synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.120 2.5.1.120] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6xig FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6xig OCA], [https://pdbe.org/6xig PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6xig RCSB], [https://www.ebi.ac.uk/pdbsum/6xig PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6xig ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6xig FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6xig OCA], [http://pdbe.org/6xig PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6xig RCSB], [http://www.ebi.ac.uk/pdbsum/6xig PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6xig ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[[http://www.uniprot.org/uniprot/C6XW09_PEDHD C6XW09_PEDHD]] Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.[HAMAP-Rule:MF_00993]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 21:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Aminodeoxyfutalosine synthase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Pedhd]]
[[Category: Almo SC]]
[[Category: Almo, S C]]
[[Category: Bonanno JB]]
[[Category: Bonanno, J B]]
[[Category: Grove TL]]
[[Category: Grove, T L]]
[[Category: Biosynthetic protein]]
[[Category: Iron-sulfur cluster]]
[[Category: Menaquinone biosynthesis]]
[[Category: Radical sam]]