6vxu: Difference between revisions

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'''Unreleased structure'''


The entry 6vxu is ON HOLD  until Paper Publication
==Structure of Human Vaccinia-related Kinase 1 (VRK1) bound to ACH471==
<StructureSection load='6vxu' size='340' side='right'caption='[[6vxu]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[6vxu]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6VXU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6VXU FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=RTJ:(7R)-8-(cyclopropylmethyl)-2-[(3,5-difluoro-4-hydroxyphenyl)amino]-7-methyl-5-(prop-2-yn-1-yl)-7,8-dihydropteridin-6(5H)-one'>RTJ</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=VBD:(7S)-8-(cyclopropylmethyl)-2-[(3,5-difluoro-4-hydroxyphenyl)amino]-7-methyl-5-(prop-2-yn-1-yl)-7,8-dihydropteridin-6(5H)-one'>VBD</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6vxu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6vxu OCA], [https://pdbe.org/6vxu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6vxu RCSB], [https://www.ebi.ac.uk/pdbsum/6vxu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6vxu ProSAT]</span></td></tr>
</table>
== Disease ==
[https://www.uniprot.org/uniprot/VRK1_HUMAN VRK1_HUMAN] Pontocerebellar hypoplasia type 1. The disease is caused by mutations affecting the gene represented in this entry.
== Function ==
[https://www.uniprot.org/uniprot/VRK1_HUMAN VRK1_HUMAN] Serine/threonine kinase involved in Golgi disassembly during the cell cycle: following phosphorylation by PLK3 during mitosis, required to induce Golgi fragmentation. Acts by mediating phosphorylation of downstream target protein. Phosphorylates 'Thr-18' of p53/TP53 and may thereby prevent the interaction between p53/TP53 and MDM2. Phosphorylates casein and histone H3. Phosphorylates BANF1: disrupts its ability to bind DNA, reduces its binding to LEM domain-containing proteins and causes its relocalization from the nucleus to the cytoplasm. Phosphorylates ATF2 which activates its transcriptional activity.<ref>PMID:10951572</ref> <ref>PMID:14645249</ref> <ref>PMID:15105425</ref> <ref>PMID:16495336</ref> <ref>PMID:18617507</ref> <ref>PMID:19103756</ref>


Authors: dos Reis, C.V., Dutra, L.A., Gama, F.H., Mascarello, A., Azevedo, H., Guimaraes, C.R., Massirer, K.B., Arruda, P., Edwards, A.M., Counago, R.M., Structural Genomics Consortium (SGC)
==See Also==
 
*[[Serine/threonine protein kinase 3D structures|Serine/threonine protein kinase 3D structures]]
Description: Structure of Human Vaccinia-related Kinase 1 (VRK1) bound to ACH471
== References ==
[[Category: Unreleased Structures]]
<references/>
[[Category: Gama, F.H]]
__TOC__
[[Category: Edwards, A.M]]
</StructureSection>
[[Category: Dutra, L.A]]
[[Category: Homo sapiens]]
[[Category: Arruda, P]]
[[Category: Large Structures]]
[[Category: Structural Genomics Consortium (Sgc)]]
[[Category: Arruda P]]
[[Category: Massirer, K.B]]
[[Category: Azevedo H]]
[[Category: Mascarello, A]]
[[Category: Counago RM]]
[[Category: Azevedo, H]]
[[Category: Dutra LA]]
[[Category: Counago, R.M]]
[[Category: Edwards AM]]
[[Category: Dos Reis, C.V]]
[[Category: Gama FH]]
[[Category: Guimaraes, C.R]]
[[Category: Guimaraes CR]]
[[Category: Mascarello A]]
[[Category: Massirer KB]]
[[Category: Dos Reis CV]]
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