1cf8: Difference between revisions

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~~[[Image:1cf8.jpg|left|200px]]~~

<!--

==Convergence of catalytic antibody and terpene cyclase mechanisms: polyene cyclization directed by carbocation-pi interactions==

~~The line below this paragraph, containing~~ "~~STRUCTURE_1cf8~~"~~, creates the~~ "~~Structure Box~~" ~~on the page~~.

~~You may change the PDB parameter~~ (~~which sets the PDB file loaded into the applet~~)

== Structural highlights ==

~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded)~~,

<table><tr><td colspan='2'>[[1cf8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CF8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1CF8 FirstGlance]. <br>

~~or leave~~ the ~~SCENE parameter empty for the default display.~~

</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7Å</td></tr>

-->

<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=HAZ:4-{4-[2-(1A,7A-DIMETHYL-4-OXY-OCTAHYDRO-1-OXA-4-AZA-CYCLOPROPA[A]NAPHTHALEN-4-YL)+-ACETYLAMINO]-PHENYLCARBAMOYL}-BUTYRIC+ACID'>HAZ</scene></td></tr>

~~{{STRUCTURE_1cf8~~| ~~PDB~~=1cf8 ~~| SCENE~~= }}

<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1cf8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cf8 OCA], [https://pdbe.org/1cf8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1cf8 RCSB], [https://www.ebi.ac.uk/pdbsum/1cf8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1cf8 ProSAT]</span></td></tr>

</table>

== Function ==

[https://www.uniprot.org/uniprot/IGKC_MOUSE IGKC_MOUSE]

== Evolutionary Conservation ==

[[Image:Consurf_key_small.gif|200px|right]]

Check<jmol>

<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cf/1cf8_consurf.spt"</scriptWhenChecked>

<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>

<text>to colour the structure by Evolutionary Conservation</text>

</jmolCheckbox>

</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1cf8 ConSurf].

~~'''Convergence of catalytic antibody and terpene cyclase mechanisms: polyene cyclization directed by carbocation-pi interactions'''~~

==See Also==

*[[Monoclonal Antibodies 3D structures|Monoclonal Antibodies 3D structures]]

__TOC__

==~~About this Structure~~==

</StructureSection>

~~Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CF8 OCA].~~

[[Category: Large Structures]]

[[~~Category: Christianson, D W.~~]]

[[Category: Mus musculus]]

~~[[Category: Hasserodt, J.]]~~

[[Category: Christianson DW]]

[[Category: ~~Janda, K D.~~]]

[[Category: Hasserodt J]]

[[Category: ~~Jones, T.~~]]

[[Category: Janda KD]]

[[Category: ~~Lerner, R A.~~]]

[[Category: Jones T]]

[[Category: ~~Paschall, C M.~~]]

[[Category: Lerner RA]]

[[Category: ~~Carbocation~~]]

[[Category: Paschall CM]]

[[Category: ~~Catalytic antibody~~]]

[[Category: ~~Cyclization cascade~~]]

[[Category: ~~Terpenoid synthase]~~]

~~''Page seeded by [http://oca.weizmann.ac.il/oca OCA~~ ] ~~on Fri May 2 12:40:09 2008''~~

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@@ Line 1: / Line 1: @@
-[[Image:1cf8.jpg|left|200px]]
-<!--
+==Convergence of catalytic antibody and terpene cyclase mechanisms: polyene cyclization directed by carbocation-pi interactions==
-The line below this paragraph, containing "STRUCTURE_1cf8", creates the "Structure Box" on the page.
+<StructureSection load='1cf8' size='340' side='right'caption='[[1cf8]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1cf8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CF8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1CF8 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=HAZ:4-{4-[2-(1A,7A-DIMETHYL-4-OXY-OCTAHYDRO-1-OXA-4-AZA-CYCLOPROPA[A]NAPHTHALEN-4-YL)+-ACETYLAMINO]-PHENYLCARBAMOYL}-BUTYRIC+ACID'>HAZ</scene></td></tr>
-{{STRUCTURE_1cf8|  PDB=1cf8  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1cf8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cf8 OCA], [https://pdbe.org/1cf8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1cf8 RCSB], [https://www.ebi.ac.uk/pdbsum/1cf8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1cf8 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/IGKC_MOUSE IGKC_MOUSE]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cf/1cf8_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1cf8 ConSurf].
+<div style="clear:both"></div>
-'''Convergence of catalytic antibody and terpene cyclase mechanisms: polyene cyclization directed by carbocation-pi interactions'''
+==See Also==
+*[[Monoclonal Antibodies 3D structures|Monoclonal Antibodies 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CF8 OCA].
+[[Category: Large Structures]]
-[[Category: Christianson, D W.]]
+[[Category: Mus musculus]]
-[[Category: Hasserodt, J.]]
+[[Category: Christianson DW]]
-[[Category: Janda, K D.]]
+[[Category: Hasserodt J]]
-[[Category: Jones, T.]]
+[[Category: Janda KD]]
-[[Category: Lerner, R A.]]
+[[Category: Jones T]]
-[[Category: Paschall, C M.]]
+[[Category: Lerner RA]]
-[[Category: Carbocation]]
+[[Category: Paschall CM]]
-[[Category: Catalytic antibody]]
-[[Category: Cyclization cascade]]
-[[Category: Terpenoid synthase]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May  2 12:40:09 2008''