5ok4: Difference between revisions

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<StructureSection load='5ok4' size='340' side='right'caption='[[5ok4]], [[Resolution|resolution]] 1.29&Aring;' scene=''>
<StructureSection load='5ok4' size='340' side='right'caption='[[5ok4]], [[Resolution|resolution]] 1.29&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5ok4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanothermobacter_marburgensis_str._marburg Methanothermobacter marburgensis str. marburg]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OK4 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5OK4 FirstGlance]. <br>
<table><tr><td colspan='2'>[[5ok4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanothermobacter_marburgensis_str._Marburg Methanothermobacter marburgensis str. Marburg]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OK4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5OK4 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=FEG:5-O-[(S)-{[2-(CARBOXYMETHYL)-6-HYDROXY-3,5-DIMETHYLPYRIDIN-4-YL]OXY}(HYDROXY)PHOSPHORYL]GUANOSINE'>FEG</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.29&#8491;</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/5,10-methenyltetrahydromethanopterin_hydrogenase 5,10-methenyltetrahydromethanopterin hydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.12.98.2 1.12.98.2] </span></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=FEG:5-O-[(S)-{[2-(CARBOXYMETHYL)-6-HYDROXY-3,5-DIMETHYLPYRIDIN-4-YL]OXY}(HYDROXY)PHOSPHORYL]GUANOSINE'>FEG</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5ok4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ok4 OCA], [http://pdbe.org/5ok4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ok4 RCSB], [http://www.ebi.ac.uk/pdbsum/5ok4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ok4 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ok4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ok4 OCA], [https://pdbe.org/5ok4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ok4 RCSB], [https://www.ebi.ac.uk/pdbsum/5ok4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ok4 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/HMD_METTM HMD_METTM]] Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT.  
[https://www.uniprot.org/uniprot/HMD_METTM HMD_METTM] Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: 5,10-methenyltetrahydromethanopterin hydrogenase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Methanothermobacter marburgensis str. marburg]]
[[Category: Methanothermobacter marburgensis str. Marburg]]
[[Category: Ataka, K]]
[[Category: Ataka K]]
[[Category: Bill, E]]
[[Category: Bill E]]
[[Category: Ermler, U]]
[[Category: Ermler U]]
[[Category: Huang, G]]
[[Category: Huang G]]
[[Category: Shima, S]]
[[Category: Shima S]]
[[Category: Wagner, T]]
[[Category: Wagner T]]
[[Category: Fe-guanylylpyridinol cofactor]]
[[Category: H2]]
[[Category: Hydrogenase]]
[[Category: Hydrogenation]]
[[Category: Inactivation]]
[[Category: Methanogenesis]]
[[Category: Methenyl-tetrahydromethanopterin]]
[[Category: Methylene-tetrahydromethanopterin]]
[[Category: O2]]
[[Category: Oxidoreductase]]

Latest revision as of 16:52, 13 December 2023

Crystal structure of native [Fe]-hydrogenase Hmd from Methanothermobacter marburgensis inactivated by O2.

5ok4, resolution 1.29Å

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