Jmol/Interactivity: Difference between revisions

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Karsten Theis (talk | contribs)
Editor, Macro, Print3D
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Karsten Theis (talk | contribs)
Editor, Macro, Print3D
4,602 edits
No edit summary
 
(16 intermediate revisions by the same user not shown)
Line 83: Line 83:
Again, you can use a template to type less:
Again, you can use a template to type less:
  <nowiki>
  <nowiki>
{{subst:Hide button|ATP and metals|(ligand or ATP)}}</nowiki>
{{subst:Hide button|ligand or ATP|(ligand or ATP)}}</nowiki>


<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>display displayed or ATP</scriptWhenChecked>
    <scriptWhenUnchecked>hide ATP or hidden</scriptWhenUnchecked>
    <checked>true</checked>
    <text> ATP molecule </text>
  </jmolCheckbox>
</jmol>


===Radio button===
===Radio button===


Please load <scene name='84/849728/Overall/1'>this scene</scene> before trying out the radiobuttons.
Please load <scene name='37/376372/Product_complex/6'>this scene</scene> before trying out the radiobuttons.
This set of buttons selects one side chain to be shown (or none).
This set of buttons selects one side chain to be shown (or none).
<jmol>
<jmol>
Line 164: Line 174:
Again, you can use a template to type less:
Again, you can use a template to type less:
  <nowiki>
  <nowiki>
{{subst:Store view buttons</nowiki>
{{subst:Store view buttons}}</nowiki>
 
For more than one view, just add another pair of buttons and change view1 to view2. For a more elaborate example how to use buttons to dock a ligand, see [[User:Karsten Theis/Animation course]].
 
==Button to choose a fixed orientation and view==
 
Here is the <scene name='84/849728/Uvrb/1'>structure of UvrB</scene>. To zoom into different areas, use the two buttons below. The orientation and view are set manually and retrieved with the command "show moveto".
 
<jmol>
  <jmolButton>
    <script>moveto 1.0 { -905 -235 355 100.12} 535.03 0.0 0.0 {42.099225806451614 43.53887096774192 61.17029032258063} 68.42333343999844 {0 0 0} 0 0 0 3.0 0.0 0.0;</script>
    <text>🔎ATP binding</text>
  </jmolButton>
</jmol>
 
<jmol>
  <jmolButton>
    <script>moveto 1.0 { -953 -276 126 132.73} 305.9 0.0 0.0 {61.51899999999999 9.498000000000001 60.450250000000004} 66.2379949723743 {0 0 0} 0 0 0 3.0 0.0 0.0;</script>
    <text>🔎DNA padlock</text>
  </jmolButton>
</jmol>
 
<nowiki>
<jmol>
  <jmolButton>
    <script>moveto 1.0 { -953 -276 126 132.73} 305.9 0.0 0.0
{61.51899999999999 9.498000000000001 60.450250000000004}
66.2379949723743 {0 0 0} 0 0 0 3.0 0.0 0.0;</script>
    <text>🔎DNA padlock</text>
  </jmolButton>
</jmol></nowiki>
 
Again, you can use a template to type less:
 
<nowiki>
{{subst:Lookat button|ATP binding|1.0 { -905 -235 355 100.12}
535.03 0.0 0.0 {42.099225806451614 43.53887096774192 61.17029032258063}
68.42333343999844 {0 0 0} 0 0 0 3.0 0.0 0.0;}}</nowiki>


</StructureSection>
</StructureSection>
Retrieved from "https://proteopedia.org/Jmol/Interactivity"