3ip2: Difference between revisions

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<StructureSection load='3ip2' size='340' side='right'caption='[[3ip2]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='3ip2' size='340' side='right'caption='[[3ip2]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3ip2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bubble-tip_anemone Bubble-tip anemone]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IP2 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3IP2 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3ip2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Entacmaea_quadricolor Entacmaea quadricolor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IP2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IP2 FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NRQ:{(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[3-(METHYLTHIO)PROPANIMIDOYL]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>NRQ</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3ip2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ip2 OCA], [http://pdbe.org/3ip2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ip2 RCSB], [http://www.ebi.ac.uk/pdbsum/3ip2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ip2 ProSAT]</span></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NRQ:{(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[3-(METHYLTHIO)PROPANIMIDOYL]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>NRQ</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ip2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ip2 OCA], [https://pdbe.org/3ip2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ip2 RCSB], [https://www.ebi.ac.uk/pdbsum/3ip2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ip2 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/RFP_ENTQU RFP_ENTQU] Pigment protein.<ref>PMID:12185250</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ip/3ip2_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ip/3ip2_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bubble-tip anemone]]
[[Category: Entacmaea quadricolor]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Adams, S R]]
[[Category: Adams SR]]
[[Category: Aguilera, T A]]
[[Category: Aguilera TA]]
[[Category: Alber, T]]
[[Category: Alber T]]
[[Category: Campbell, R E]]
[[Category: Campbell RE]]
[[Category: Lin, M Z]]
[[Category: Lin MZ]]
[[Category: Ma, W]]
[[Category: Ma W]]
[[Category: McKeown, M R]]
[[Category: McKeown MR]]
[[Category: Ng, H L]]
[[Category: Ng HL]]
[[Category: Shaner, N C]]
[[Category: Shaner NC]]
[[Category: Tsien, R Y]]
[[Category: Tsien RY]]
[[Category: Fluorescent protein]]

Latest revision as of 08:11, 19 March 2026

Crystal structure of red fluorescent protein Neptune at pH 7.0

3ip2, resolution 1.60Å

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